Your message dated Fri, 03 Apr 2020 07:03:45 +0000 with message-id <[email protected]> and subject line Bug#934281: fixed in r-bioc-metagenomeseq 1.28.2-1 has caused the Debian Bug report #934281, regarding r-bioc-metagenomeseq: Should not migrate to testing to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact [email protected] immediately.) -- 934281: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=934281 Debian Bug Tracking System Contact [email protected] with problems
--- Begin Message ---Package: r-bioc-metagenomeseq Severity: grave Tags: upstream Justification: renders package unusable Hi, we can not upgrade r-bioc-metagenomeseq to the new upstream version since it got a new dependency from a non-free package. We are sorting this out with upstream but this might take time. All other r-bioc packages are depending from the virtual package r-api-bioc-3.9 while r-bioc-metagenomeseq 1.24.1-1 depends r-api-bioc-3.8. So there is a conflicting dependency. Kind regards Andreas. -- System Information: Debian Release: 10.0 APT prefers testing APT policy: (501, 'testing'), (500, 'buildd-unstable'), (50, 'unstable'), (5, 'experimental'), (1, 'buildd-experimental') Architecture: amd64 (x86_64) Kernel: Linux 4.19.0-5-amd64 (SMP w/4 CPU cores) Kernel taint flags: TAINT_PROPRIETARY_MODULE, TAINT_OOT_MODULE, TAINT_UNSIGNED_MODULE Locale: LANG=de_DE.utf8, LC_CTYPE=de_DE.utf8 (charmap=UTF-8), LANGUAGE=de_DE:de (charmap=UTF-8) Shell: /bin/sh linked to /bin/dash Init: systemd (via /run/systemd/system) LSM: AppArmor: enabled Versions of packages r-bioc-metagenomeseq depends on: pn r-api-bioc-3.8 <none> ii r-base-core [r-api-3.5] 3.5.2-1 pn r-bioc-biobase <none> pn r-bioc-limma <none> pn r-cran-foreach <none> pn r-cran-glmnet <none> pn r-cran-gplots <none> ii r-cran-matrix 1.2-15-1 ii r-cran-matrixstats 0.54.0-1 ii r-cran-rcolorbrewer 1.1-2-2 Versions of packages r-bioc-metagenomeseq recommends: ii r-cran-testthat 2.0.1-1 Versions of packages r-bioc-metagenomeseq suggests: pn r-bioc-annotate <none> pn r-bioc-biocgenerics <none> pn r-bioc-biomformat <none> pn r-cran-gss <none> ii r-cran-knitr 1.21+dfsg-2 pn r-cran-vegan <none>
--- End Message ---
--- Begin Message ---Source: r-bioc-metagenomeseq Source-Version: 1.28.2-1 Done: =?utf-8?q?Dylan_A=C3=AFssi?= <[email protected]> We believe that the bug you reported is fixed in the latest version of r-bioc-metagenomeseq, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to [email protected], and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Dylan Aïssi <[email protected]> (supplier of updated r-bioc-metagenomeseq package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing [email protected]) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 1.8 Date: Fri, 03 Apr 2020 08:48:00 +0200 Source: r-bioc-metagenomeseq Architecture: source Version: 1.28.2-1 Distribution: unstable Urgency: medium Maintainer: Debian R Packages Maintainers <[email protected]> Changed-By: Dylan Aïssi <[email protected]> Closes: 934281 Changes: r-bioc-metagenomeseq (1.28.2-1) unstable; urgency=medium . * Team upload. . [ Andreas Tille ] * New upstream version (closes: #934281) * debhelper-compat 12 * Standards-Version: 4.4.0 * Build-Depends: r-bioc-wrench, r-cran-ihw . [ Steffen Moeller ] * Standards-Version: 4.5.0 (routine-update) * autopkgtest: s/ADTTMP/AUTOPKGTEST_TMP/g (routine-update) * debian/copyright: use spaces rather than tabs to start continuation lines. * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse. . [ Dylan Aïssi ] * Testsuite: autopkgtest-pkg-r (routine-update) * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) Checksums-Sha1: 341bcb9dfa63c4a7e59b2787d7cdf33b0fb49b58 2318 r-bioc-metagenomeseq_1.28.2-1.dsc f9b1e7707f72635c4c4f32c9ed53711ca4303b78 2125467 r-bioc-metagenomeseq_1.28.2.orig.tar.gz fa109c6188969b5d3bb9b8987ba02c73d1810efd 4744 r-bioc-metagenomeseq_1.28.2-1.debian.tar.xz 1cd780cc3f5d25e0d69bbe48484655b7765a4fb8 9601 r-bioc-metagenomeseq_1.28.2-1_amd64.buildinfo Checksums-Sha256: 8088a0dd430a1a7f36b10f41ed433913fa08da201c13d673df6d3a73e95fb236 2318 r-bioc-metagenomeseq_1.28.2-1.dsc 3e8083ce26bbcc76023e41b8402094102683e555a097e7c0a0650f3b69fd365b 2125467 r-bioc-metagenomeseq_1.28.2.orig.tar.gz 82efe1b1e026a91c4fce6679b6df0d785a5e79ff0d23a1a40ed8cba02d11f44c 4744 r-bioc-metagenomeseq_1.28.2-1.debian.tar.xz 5fb3ae1b272d4e469c0780e300ce0a8dd8d1f89d8e65d5fedb22ee8e907c1973 9601 r-bioc-metagenomeseq_1.28.2-1_amd64.buildinfo Files: 07fd3efba137e21cb703b8f6c9ee7276 2318 gnu-r optional r-bioc-metagenomeseq_1.28.2-1.dsc e175de6dcab5a5b53761972d0490114c 2125467 gnu-r optional r-bioc-metagenomeseq_1.28.2.orig.tar.gz e697c8f0c5dd838565d686e0b3b05297 4744 gnu-r optional r-bioc-metagenomeseq_1.28.2-1.debian.tar.xz 31a3b20d1be62dbd61a5f017fe09805a 9601 gnu-r optional r-bioc-metagenomeseq_1.28.2-1_amd64.buildinfo -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEmjwHvQbeL0FugTpdYS7xYT4FD1QFAl6G3YUACgkQYS7xYT4F D1Sopw/+JKIGA9HBtjBHeXORCuoMh+pi5BelFIYZL/NxCbeCsb2wuzHleMZPGTBJ 2rVS/o9qVg/3lIgmCN5KDnDhoQF9A6u491iBnL5sOOa5nffLjyku7wWUSjDxx8nj OsUSynN6wV3/AWNCTFbED1vrtAVuYJPgE0BvMJxcKjTG7nIQ2g4EPDlztsUytsUD AuHApKDaXgTtV4/LZq0+W1bwXbd3RtyUl4WUIlF3Uxhza2Amj3fbSNESGN9x/oso 0tm5DScG6+ipZ2y0rlBrDiEH/kmvX9gMOBTedsDPdL//olKvCtlbKaO+sybaOSG2 mnAA5dbV0W/D3nVH9LzP5o7DpivBHB4eD8F19shjeCzIgDF6j1bIsLt2wEit5s9L yY/Sb7nh/KbtRl1GjP8v0ivkfUSiWkkS/xOUeePrRrN9Xj7KXAYG2OpZlRtIkSDn 9OC+tkAUDh8BVPZNriiHJSgeqZSE5VAcUBlW5xRlknFeiYd5Y38cQ9bDEJ9DWCGR IMPFP1Fv6YcGOIJIdlIeZtm4JV7eOd/p/wtY1CeSjTwxCn//EzQ+bBYKZN3mYOeD Gy7zOMIBfz8k1em0z/iDW+QdrIQQWpn+1aPXZfCXDjLrtw62Gz9g1A/7qic8YdQx 9s2NTGWpoA7HkUJCqaVYnP8HmooxkjfheADX5lwD0fXUS+f7LGY= =yo/j -----END PGP SIGNATURE-----
--- End Message ---
