Your message dated Thu, 03 Jan 2019 09:51:52 +0000 with message-id <[email protected]> and subject line Bug#917957: fixed in samtools 1.9-2 has caused the Debian Bug report #917957, regarding samtools: FTBFS on i386 to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact [email protected] immediately.) -- 917957: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=917957 Debian Bug Tracking System Contact [email protected] with problems
--- Begin Message ---Source: samtools Version: 1.9-1 Severity: serious Tags: ftbfs Hi Maintainer Since the upload of htslib 1.9 to unstable, samtools FTBFS on i386 [1][2] with the following error: test_stats: /<<PKGBUILDDIR>>/samtools stats /<<PKGBUILDDIR>>/test/stat/12_overlaps.bam -p -t /<<PKGBUILDDIR>>/test/stat/12_3reads.bed | tail -n+4 The outputs stdout differ: /<<PKGBUILDDIR>>/test/stat/12.3reads.nooverlap.expected /<<PKGBUILDDIR>>/test/stat/12.3reads.nooverlap.expected.new .. failed ... ... Number of tests: total .. 565 passed .. 540 failed .. 1 expected failure .. 24 unexpected pass .. 0 Regards Graham [1] https://buildd.debian.org/status/logs.php?pkg=samtools&arch=i386 [2] https://tests.reproducible-builds.org/debian/history/i386/samtools.html
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--- Begin Message ---Source: samtools Source-Version: 1.9-2 We believe that the bug you reported is fixed in the latest version of samtools, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to [email protected], and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Michael R. Crusoe <[email protected]> (supplier of updated samtools package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing [email protected]) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 1.8 Date: Thu, 03 Jan 2019 00:21:01 -0800 Source: samtools Binary: samtools samtools-test Architecture: source Version: 1.9-2 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team <[email protected]> Changed-By: Michael R. Crusoe <[email protected]> Description: samtools - processing sequence alignments in SAM, BAM and CRAM formats samtools-test - test files for the samtools package Closes: 917957 Changes: samtools (1.9-2) unstable; urgency=medium . * Team upload. * Turn on SSE for i386. Closes: #917957 * Standards-Version: 4.3.0 Checksums-Sha1: b25a2f7854bde9553787483aeec6bdc00973ac00 2174 samtools_1.9-2.dsc 864c501e9ec9bcf805741f248c3757dd6fc6358b 20756 samtools_1.9-2.debian.tar.xz 33c8a01cb9278a3e44d14e59d030e9bc45c5bd00 7014 samtools_1.9-2_source.buildinfo Checksums-Sha256: e50b6767760c3a338b403008cbf47cf52d9a9bd547465c5553945e6b3cfc14b4 2174 samtools_1.9-2.dsc df09d50f95df3eb8be5ddea5e50dba4d224db87a5c9a3d6c15fde9125628cf72 20756 samtools_1.9-2.debian.tar.xz 374fa5b422d01d0e881b027b90e1a6b1564176316327b9203831051c14e6b105 7014 samtools_1.9-2_source.buildinfo Files: c84ff104bcff13dd45d5ea9cb31394c3 2174 science optional samtools_1.9-2.dsc 980059f1f51dbf62fd01207d9cf3ae21 20756 science optional samtools_1.9-2.debian.tar.xz 4fdf6f0cebf7c3c409649fe278bd553e 7014 science optional samtools_1.9-2_source.buildinfo -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEck1gkzcRPHEFUNdHPCZ2P2xn5uIFAlwt1qEACgkQPCZ2P2xn 5uKpSA//TRK1uEvLXLB/I5JfGLSaB1s7NkNSp40hTda+6X96RxnHkNhhsfuOJQLX 7oKpe+meVInxOee94mWyA5bjZu3hfZuds+5MGh0Vdv9bmnViQKoj/6ck5Dks4B13 poM9BbmwzyxSni5ttYGtZ6cjP6Pgrqrn1mB8qphHTHMlwMG+pgPopkXKoKU5noob xrYeE1nmitjH7W0/XjiJIfMLiJE1yAJ/PR0J6TdWx7Kr47J0sc7tVo/2P2N7c4+I f+xSuIN7nvZcqebOiFYC2UOo7wlmPjVjrWyURvh/csljee4+u6QoeYGxWlBz3y0t CO+hWd/tXB7odSN+63pm/pGfjOCiEFQMgGC7FuwGaX1Lju3Yjwcohmss7zPG1Q/g TA7gYmQJXEKNnpb6AjQXz8D8+/wskThx4R041PUi2/4wNT6XLF1vwQIm7Q4QxEQG 28ZberdBfA8/wioS9Zah2LAH747QymiYXHvpv0HgaVOP7XSiRRU7vB0QlozJQmih nCk1F4J0MJSun7+53DgfIEU/ucSnlHScuOnu8j0XckEFiL6Dwo4Y1w8u1t+cX5MQ qF2iTpSpJv+I/lWfYfUsEE66juY0t+gDXA/oZsPWI/DPAum7ws8rig1ZavN4cuqL WdEyfbjVnH4oJc8YTW8ZvCvgkwyYJP9mTFNFrH/eIYT3Fo/bl1k= =Ch3w -----END PGP SIGNATURE-----
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