Your message dated Sun, 02 Dec 2018 09:51:37 +0000
with message-id <[email protected]>
and subject line Bug#912451: fixed in staden-io-lib 1.14.11-2
has caused the Debian Bug report #912451,
regarding staden-io-lib FTBFS on !x86: test failures
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
912451: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=912451
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Source: staden-io-lib
Version: 1.14.11-1
Severity: serious
Tags: ftbfs
https://buildd.debian.org/status/package.php?p=staden-io-lib&suite=sid
...
FAIL: scram
===========
Loading ce.fa
Generating ce#sorted.sam
Generating ce#unsorted.sam
=== testing ./data/c1#bounds.sam ===
./scram.test: 27: [: ./data/c1#bounds.sam: unexpected operator
../progs/scramble ./data/c1#bounds.sam test.out/c1#bounds.sam
../progs/scramble -r ./data/c1.fa ./data/c1#bounds.sam
test.out/c1#bounds.full.cram
../progs/scramble ./data/c1#bounds.sam > test.out/tmp.sam
../progs/scramble test.out/c1#bounds.full.cram > test.out/c1#bounds.full.sam
../progs/scramble -O bam test.out/c1#bounds.full.cram >
test.out/c1#bounds.full.bam
../progs/scramble test.out/c1#bounds.full.bam test.out/tmp.sam
corrupted size vs. prev_size
Aborted
FAIL scram.test (exit status: 1)
FAIL: scram_mt
==============
=== testing ./data/c1#bounds.sam ===
./scram.test: 27: [: ./data/c1#bounds.sam: unexpected operator
../progs/scramble -t4 ./data/c1#bounds.sam test.out/c1#bounds.sam
../progs/scramble -t4 -r ./data/c1.fa ./data/c1#bounds.sam
test.out/c1#bounds.full.cram
../progs/scramble -t4 ./data/c1#bounds.sam > test.out/tmp.sam
../progs/scramble -t4 test.out/c1#bounds.full.cram >
test.out/c1#bounds.full.sam
../progs/scramble -t4 -O bam test.out/c1#bounds.full.cram >
test.out/c1#bounds.full.bam
../progs/scramble -t4 test.out/c1#bounds.full.bam test.out/tmp.sam
corrupted size vs. prev_size
Aborted
FAIL scram_mt.test (exit status: 1)
============================================================================
Testsuite summary for io_lib 1.14.11
============================================================================
# TOTAL: 9
# PASS: 7
# SKIP: 0
# XFAIL: 0
# FAIL: 2
# XPASS: 0
# ERROR: 0
============================================================================
See tests/test-suite.log
============================================================================
make[4]: *** [Makefile:716: test-suite.log] Error 1
--- End Message ---
--- Begin Message ---
Source: staden-io-lib
Source-Version: 1.14.11-2
We believe that the bug you reported is fixed in the latest version of
staden-io-lib, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Andreas Tille <[email protected]> (supplier of updated staden-io-lib package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Sun, 02 Dec 2018 08:50:21 +0100
Source: staden-io-lib
Binary: staden-io-lib-utils libstaden-read-dev libstaden-read13
staden-io-lib-examples
Architecture: source
Version: 1.14.11-2
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<[email protected]>
Changed-By: Andreas Tille <[email protected]>
Description:
libstaden-read-dev - development files for libstaden-read
libstaden-read13 - Staden library for reading and writing DNA sequencing
results
staden-io-lib-examples - programs for manipulating DNA sequencing files (usage
examples)
staden-io-lib-utils - programs for manipulating DNA sequencing files
Closes: 912451
Changes:
staden-io-lib (1.14.11-2) unstable; urgency=medium
.
* Fix build on non-x86 architectures (thanks to James Bonfield
<[email protected]>)
Closes: #912451
* Remove trailing whitespace in debian/changelog
* Remove trailing whitespace in debian/copyright
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Files:
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