Source: libbio-samtools-perl Version: 1.43-1 Severity: serious Tags: ftbfs Control: block 902557 with -1
This package fails to build on sid/amd64: x86_64-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -shared -L/usr/local/lib -fstack-protector-strong -o blib/arch/auto/Bio/DB/Sam/Sam.so lib/Bio/DB/Sam.o c_bin/bam2bedgraph.o -L/usr/lib -lbam -lpthread -lz /usr/bin/ld: /usr/lib/libbam.a(bam_aux.o): relocation R_X86_64_PC32 against symbol `bam_verbose' can not be used when making a shared object; recompile with -fPIC /usr/bin/ld: final link failed: bad value collect2: error: ld returned 1 exit status error building blib/arch/auto/Bio/DB/Sam/Sam.so from lib/Bio/DB/Sam.o c_bin/bam2bedgraph.o at /usr/share/perl/5.26/ExtUtils/CBuilder/Base.pm line 321. dh_auto_build: perl Build returned exit code 2 make: *** [debian/rules:4: build] Error 2 dpkg-buildpackage: error: debian/rules build subprocess returned exit status 2 It seems to have built OK on test.reproducible-builds.org on 2018-07-12, so could be a binutils regression rather than libbam-dev? -- Niko Tyni nt...@debian.org
