Your message dated Wed, 08 Nov 2017 13:50:14 +0000
with message-id <e1ecqka-000hqb...@fasolo.debian.org>
and subject line Bug#853351: fixed in libmstoolkit 77.0.0-1.1
has caused the Debian Bug report #853351,
regarding libmstoolkit: ftbfs with GCC-7
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
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immediately.)
--
853351: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=853351
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: src:libmstoolkit
Version: 77.0.0-1
Severity: normal
Tags: sid buster
User: debian-...@lists.debian.org
Usertags: ftbfs-gcc-7
Please keep this issue open in the bug tracker for the package it
was filed for. If a fix in another package is required, please
file a bug for the other package (or clone), and add a block in this
package. Please keep the issue open until the package can be built in
a follow-up test rebuild.
The package fails to build in a test rebuild on at least amd64 with
gcc-7/g++-7, but succeeds to build with gcc-6/g++-6. The
severity of this report may be raised before the buster release.
There is no need to fix this issue in time for the stretch release.
The full build log can be found at:
http://people.debian.org/~doko/logs/gcc7-20170126/libmstoolkit_77.0.0-1_unstable_gcc7.log
The last lines of the build log are at the end of this report.
To build with GCC 7, either set CC=gcc-7 CXX=g++-7 explicitly,
or install the gcc, g++, gfortran, ... packages from experimental.
apt-get -t=experimental install g++
Common build failures are new warnings resulting in build failures with
-Werror turned on, or new/dropped symbols in Debian symbols files.
For other C/C++ related build failures see the porting guide at
http://gcc.gnu.org/gcc-7/porting_to.html
[...]
~~~~~^~~~~~~~~~~~~~~~~~~~~~
./src/MSToolkit/MSReader.cpp:1953:9: warning: ignoring return value of 'size_t
fread(void*, size_t, size_t, FILE*)', declared with attribute
warn_unused_result [-Wunused-result]
fread(&ms.convC,8,1,fileIn);
~~~~~^~~~~~~~~~~~~~~~~~~~~~
./src/MSToolkit/MSReader.cpp:1954:9: warning: ignoring return value of 'size_t
fread(void*, size_t, size_t, FILE*)', declared with attribute
warn_unused_result [-Wunused-result]
fread(&ms.convD,8,1,fileIn);
~~~~~^~~~~~~~~~~~~~~~~~~~~~
./src/MSToolkit/MSReader.cpp:1955:9: warning: ignoring return value of 'size_t
fread(void*, size_t, size_t, FILE*)', declared with attribute
warn_unused_result [-Wunused-result]
fread(&ms.convE,8,1,fileIn);
~~~~~^~~~~~~~~~~~~~~~~~~~~~
./src/MSToolkit/MSReader.cpp:1956:9: warning: ignoring return value of 'size_t
fread(void*, size_t, size_t, FILE*)', declared with attribute
warn_unused_result [-Wunused-result]
fread(&ms.convI,8,1,fileIn);
~~~~~^~~~~~~~~~~~~~~~~~~~~~
./src/MSToolkit/MSReader.cpp:1958:10: warning: ignoring return value of 'size_t
fread(void*, size_t, size_t, FILE*)', declared with attribute
warn_unused_result [-Wunused-result]
fread(&ms.TIC,8,1,fileIn);
~~~~~^~~~~~~~~~~~~~~~~~~~
./src/MSToolkit/MSReader.cpp:1959:10: warning: ignoring return value of 'size_t
fread(void*, size_t, size_t, FILE*)', declared with attribute
warn_unused_result [-Wunused-result]
fread(&ms.IIT,4,1,fileIn);
~~~~~^~~~~~~~~~~~~~~~~~~~
./src/MSToolkit/MSReader.cpp:1962:8: warning: ignoring return value of 'size_t
fread(void*, size_t, size_t, FILE*)', declared with attribute
warn_unused_result [-Wunused-result]
fread(&ms.numZStates,4,1,fileIn);
~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
./src/MSToolkit/MSReader.cpp:1964:24: warning: ignoring return value of 'size_t
fread(void*, size_t, size_t, FILE*)', declared with attribute
warn_unused_result [-Wunused-result]
if(iVersion>=3) fread(&ms.numEZStates,4,1,fileIn);
~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~
./src/MSToolkit/MSReader.cpp:1967:8: warning: ignoring return value of 'size_t
fread(void*, size_t, size_t, FILE*)', declared with attribute
warn_unused_result [-Wunused-result]
fread(&ms.numDataPoints,4,1,fileIn);
~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Makefile:90: recipe for target 'MSReader.o' failed
make[3]: *** [MSReader.o] Error 1
make[3]: Leaving directory '/<<PKGBUILDDIR>>'
Makefile:38: recipe for target 'solib' failed
make[2]: *** [solib] Error 2
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
debian/rules:33: recipe for target 'override_dh_auto_build' failed
make[1]: *** [override_dh_auto_build] Error 2
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
debian/rules:23: recipe for target 'build' failed
make: *** [build] Error 2
dpkg-buildpackage: error: debian/rules build gave error exit status 2
--- End Message ---
--- Begin Message ---
Source: libmstoolkit
Source-Version: 77.0.0-1.1
We believe that the bug you reported is fixed in the latest version of
libmstoolkit, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 853...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Gilles Filippini <p...@debian.org> (supplier of updated libmstoolkit package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Thu, 02 Nov 2017 22:42:31 +0100
Source: libmstoolkit
Binary: libmstoolkit-dev libmstoolkit77 libmstoolkit77-dbg
Architecture: source
Version: 77.0.0-1.1
Distribution: unstable
Urgency: medium
Maintainer: The Debichem Group <debichem-de...@lists.alioth.debian.org>
Changed-By: Gilles Filippini <p...@debian.org>
Description:
libmstoolkit-dev - libraries for manipulating mass spectrometry data - dev
files
libmstoolkit77 - libraries for manipulating mass spectrometry data - runtime
libmstoolkit77-dbg - libraries for manipulating mass spectrometry data - debug
symbols
Closes: 853351
Changes:
libmstoolkit (77.0.0-1.1) unstable; urgency=medium
.
* Non-maintainer upload.
* New patch gcc-7.patch: fix FTBFS with GCC-7 (closes: #853351)
Checksums-Sha1:
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4dc872ee39294d93a255efdf9f9c8500f3fa3591 11864
libmstoolkit_77.0.0-1.1.debian.tar.xz
6ce6d803431a6a9642f05a0caeb503bea34d09b8 5754
libmstoolkit_77.0.0-1.1_source.buildinfo
Checksums-Sha256:
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libmstoolkit_77.0.0-1.1.dsc
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libmstoolkit_77.0.0-1.1.debian.tar.xz
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libmstoolkit_77.0.0-1.1_source.buildinfo
Files:
73f9e01a9b4148c8c2860c9ffcd74a69 1939 libs optional libmstoolkit_77.0.0-1.1.dsc
bef601b80a57a23cd5735f621b220d77 11864 libs optional
libmstoolkit_77.0.0-1.1.debian.tar.xz
d58b2d6101dbe21576418963df3fe9b5 5754 libs optional
libmstoolkit_77.0.0-1.1_source.buildinfo
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--- End Message ---
