Your message dated Fri, 06 Oct 2017 19:51:32 +0000
with message-id <[email protected]>
and subject line Bug#868962: fixed in python-skbio 0.5.1-3
has caused the Debian Bug report #868962,
regarding python-skbio: FTBFS: Test failures
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact [email protected]
immediately.)
--
868962: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=868962
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Source: python-skbio
Version: 0.5.1-2
Severity: serious
Tags: buster sid
User: [email protected]
Usertags: qa-ftbfs-20170719 qa-ftbfs
Justification: FTBFS on amd64
Hi,
During a rebuild of all packages in sid, your package failed to build on
amd64.
Relevant part (hopefully):
>
> ======================================================================
> FAIL: test_deepcopy_with_positional_metadata
> (skbio.sequence.tests.test_sequence.TestSequencePositionalMetadata)
> ----------------------------------------------------------------------
> Traceback (most recent call last):
> File
> "/<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.6/build/skbio/metadata/_testing.py",
> line 630, in test_deepcopy_with_positional_metadata
> obj_copy._positional_metadata.loc[0, 'bar'])
> AssertionError: unexpectedly identical: []
>
> ----------------------------------------------------------------------
> Ran 2238 tests in 44.031s
>
> FAILED (SKIP=30, errors=8, failures=6)
> E: pybuild pybuild:283: test: plugin distutils failed with: exit code=1: cd
> /<<PKGBUILDDIR>>/.pybuild/pythonX.Y_3.6/build; python3.6 -m nose
> dh_auto_test: pybuild --test --test-nose -i python{version} -p 3.6 3.5
> returned exit code 13
> debian/rules:22: recipe for target 'override_dh_auto_test' failed
The full build log is available from:
http://aws-logs.debian.net/2017/07/19/python-skbio_0.5.1-2_unstable.log
A list of current common problems and possible solutions is available at
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!
About the archive rebuild: The rebuild was done on EC2 VM instances from
Amazon Web Services, using a clean, minimal and up-to-date chroot. Every
failed build was retried once to eliminate random failures.
--- End Message ---
--- Begin Message ---
Source: python-skbio
Source-Version: 0.5.1-3
We believe that the bug you reported is fixed in the latest version of
python-skbio, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Andreas Tille <[email protected]> (supplier of updated python-skbio package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Fri, 06 Oct 2017 21:13:24 +0200
Source: python-skbio
Binary: python-skbio-doc python3-skbio
Architecture: source
Version: 0.5.1-3
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<[email protected]>
Changed-By: Andreas Tille <[email protected]>
Description:
python-skbio-doc - Data structures, algorithms, educational resources for
bioinforma
python3-skbio - Python3 data structures, algorithms, educational resources for
bi
Closes: 868962
Changes:
python-skbio (0.5.1-3) unstable; urgency=medium
.
* Standards-Version: 4.1.1
* Versioned Build-Depends: python3-pandas (>= 0.19.2)
* Apply upstream patch dealing with new pandas version
Closes: #868962
* Remove privacy breaching logo
Checksums-Sha1:
9eda1aa94799d579ec858cb69db1f610244361ba 2574 python-skbio_0.5.1-3.dsc
7e553570b1905d424c4e77c81a36416a3c4f4e35 11072
python-skbio_0.5.1-3.debian.tar.xz
e692d5fc22ac4b2107349c8984fb01534751e78f 13497
python-skbio_0.5.1-3_source.buildinfo
Checksums-Sha256:
858b83c968a450fe82ba10d64c7885ba1dd2d20b629b2040230e3a742221fce9 2574
python-skbio_0.5.1-3.dsc
4444c5c9b1b631f681245b1a4b7a4b5ae71cd60b1606e91e8b3b1dce311da467 11072
python-skbio_0.5.1-3.debian.tar.xz
bdf0ce016acae7206d131dd21223d0679899369323cb72dcec091a54059b5182 13497
python-skbio_0.5.1-3_source.buildinfo
Files:
bf7bf272c190fb78d9c0900f917cc3bb 2574 python optional python-skbio_0.5.1-3.dsc
4ba2c8c33212b598da42fac60d379249 11072 python optional
python-skbio_0.5.1-3.debian.tar.xz
939fe4c17865266c6cb333ab8adc2d1b 13497 python optional
python-skbio_0.5.1-3_source.buildinfo
-----BEGIN PGP SIGNATURE-----
iQJCBAEBCgAsFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAlnX2gsOHHRpbGxlYUBy
a2kuZGUACgkQV4oElNHGRtG3Uw/5AS8hIKMDFMI3+JRYUn4jwBik9jQyTCx7OqVT
+WvnHvsAfR/87sqlIifwB2j6e+JqpMNiS4uxA+sZNJKfNz5AK2UJY98JN1QQ+71n
YfHPuyKgQtTgsD3+zO/dQKzBEh4yRmTOrC7zQJsEynHNRqb5VaXY5uRvuZ6rqM1R
HTHwddju3qsnTQ39TXxv+qaCDpOnsqY6zjpA4xCUnR20Xs68vRWVvb/jnRWLpZ6G
q/SqqBRj0BTH7d3kpM6W6eXCImWDM3Opsdz+9c0ntkcElb0yWsba+QoS+YGrLwF4
jOwYHmra8V/GdtNUDXcbESz1xKYOOUkOBWqjD+3vhDZwqc2TcQr1CLR8ico8CwZ5
QVJIhg5AP5D/ATN4l9xiAX2gZx3PLakjdi8tBPP3cOkBeRWzL8aki4SsbVW8HE84
6GC49TWaZNZ77uHOLIzXE1k1zQ2/qP1Ip6JgBSmlTM62ImTD5eCtIleNfZle6f8Q
7dg9EFENtwrycZwmy5mUVNjc/HQq8yADpReWTONLELkwPJcTGIFSkGYbuauLG8ti
kAhZofsD/4aBKCE9/WP306kvPIqJ7GOnsWHOrMRrqJBL36YdEywa4loAd0td8Gq3
tK6OFoOp8POiWql4+AaF8uLMUOV4wTamSw5fRsbHRS87cIXn16Mi2BwOAAgSXRxD
0DMAN8U=
=2b+u
-----END PGP SIGNATURE-----
--- End Message ---
