Your message dated Sun, 03 Sep 2017 21:06:57 +0000 with message-id <e1doc6b-000dgv...@fasolo.debian.org> and subject line Bug#874042: fixed in hmmer2 2.3.2+dfsg-5 has caused the Debian Bug report #874042, regarding hmmer2: please Build-Depend on rename to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact ow...@bugs.debian.org immediately.) -- 874042: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=874042 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems
--- Begin Message ---Source: hmmer2 Version: 2.3.2+dfsg-4 Severity: serious Justification: FTBFS with impending change User: debian-p...@lists.debian.org Usertags: rename-deprecation As announced last year[1] and as advised by deprecation messages, rename(1) will be removed from the perl package after the stretch release, and this is now imminent. Your package FTBFS with perl from experimental as a result. Please add a Build-Depends: rename to your package, and all will be well again: # lkajan: rename binaries and man pages like this: s/hmm/hmm2/ - except hmmer.1, rename that to hmmer2.1: rename 's/^hmm/hmm2/;' /<<BUILDDIR>>/hmmer2-2.3.2+dfsg/debian/tmp/bin/* /bin/sh: 1: rename: not found debian/rules:31: recipe for target 'override_dh_auto_install' failed Cheers, Dominic. [1] <https://lists.debian.org/debian-devel/2016/05/msg00138.html>
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--- Begin Message ---Source: hmmer2 Source-Version: 2.3.2+dfsg-5 We believe that the bug you reported is fixed in the latest version of hmmer2, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to 874...@bugs.debian.org, and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Andreas Tille <ti...@debian.org> (supplier of updated hmmer2 package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing ftpmas...@ftp-master.debian.org) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 1.8 Date: Sun, 03 Sep 2017 21:50:24 +0200 Source: hmmer2 Binary: hmmer2 hmmer2-pvm hmmer2-doc libhmmer2-dev Architecture: source amd64 all Version: 2.3.2+dfsg-5 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team <debian-med-packag...@lists.alioth.debian.org> Changed-By: Andreas Tille <ti...@debian.org> Description: hmmer2 - profile hidden Markov models for protein sequence analysis hmmer2-doc - profile hidden Markov models for protein sequence analysis (docs) hmmer2-pvm - HMMER programs with PVM (Parallel Virtual Machine) support libhmmer2-dev - profile hidden Markov models for protein sequence analysis (devel Closes: 874042 Changes: hmmer2 (2.3.2+dfsg-5) unstable; urgency=medium . [ Steffen Moeller ] * debian/upstream/metadata: Added refs to OMICtoos, bio.tools, RRID . [ Andreas Tille ] * Build-Depends: rename Closes: #874042 * Standards-Version: 4.1.0 (no chaanges needed) * Drop autotools-dev Checksums-Sha1: a3fae70d2330228aed3f68e40728ac46dce01638 2302 hmmer2_2.3.2+dfsg-5.dsc 7363d8b9efd280ca1b9e5dcc58726ee587dd166a 12752 hmmer2_2.3.2+dfsg-5.debian.tar.xz 25933f74fc2c8a876f631fc837453f5097c78844 1316530 hmmer2-dbgsym_2.3.2+dfsg-5_amd64.deb b92035fc992031dd19a3b4453343cc8e979faa2d 79264 hmmer2-doc_2.3.2+dfsg-5_all.deb 37bd65e9a365fcce12bd92bfc247b414a6acbebf 425022 hmmer2-pvm-dbgsym_2.3.2+dfsg-5_amd64.deb 91a55800aa8fa8c8d8c24f8045c6555c0f2a3cd6 99802 hmmer2-pvm_2.3.2+dfsg-5_amd64.deb 97c8ff00a71bd6b0ce315d630054c7d8bbc235c4 7510 hmmer2_2.3.2+dfsg-5_amd64.buildinfo 7677c324bb99ad24c189da1a0179fef189962951 1519004 hmmer2_2.3.2+dfsg-5_amd64.deb dce3fde38476d5a46ce4c58fad424d56d997b753 101422 libhmmer2-dev_2.3.2+dfsg-5_amd64.deb Checksums-Sha256: 84713b364659289398eea87b6e85191541a9865e24d3c26f8d6968550a45728d 2302 hmmer2_2.3.2+dfsg-5.dsc 17d1625f3f26a10caeb37ec47d7104be3d048118344b200703e3b28ddba592fb 12752 hmmer2_2.3.2+dfsg-5.debian.tar.xz bb78ad9f3ca4ec75990c662e748ce75cb5dfbc1197c54b35590b8102c4598999 1316530 hmmer2-dbgsym_2.3.2+dfsg-5_amd64.deb 08a573e11819677569a9462068afef31340903d57fe672a5b5f49d41be3e5b70 79264 hmmer2-doc_2.3.2+dfsg-5_all.deb d52a9d2885ae3758108d86198f44f41c1e01e5ff81b76feaea85e1ccf2da3ae2 425022 hmmer2-pvm-dbgsym_2.3.2+dfsg-5_amd64.deb 69b1501b0abb3bd44d357fcff8026cd3fdbcf2bde3cebe98f153f4bb740d2c40 99802 hmmer2-pvm_2.3.2+dfsg-5_amd64.deb aa11e2af0de72c040166f0935b4acbbfcad795afc945be656d71d47670ff82ec 7510 hmmer2_2.3.2+dfsg-5_amd64.buildinfo 2c4f64a70ffd35f6d296e4106a794d8e48f75fcfac1e6c8a13efaaeb8995c25b 1519004 hmmer2_2.3.2+dfsg-5_amd64.deb 42d055d54c53972abc6a3496cea07ce498507ccd2c072932c96179f992595968 101422 libhmmer2-dev_2.3.2+dfsg-5_amd64.deb Files: 4d3661c138bdcba923e98d0c4cc00dd0 2302 science optional hmmer2_2.3.2+dfsg-5.dsc 299a5424af2b72e9330a2d7e4f2d5e37 12752 science optional hmmer2_2.3.2+dfsg-5.debian.tar.xz 093b1f7f1ea601154acaf917d234bfce 1316530 debug extra hmmer2-dbgsym_2.3.2+dfsg-5_amd64.deb 78c080fa015f53816cf9d716a93aaac8 79264 doc optional hmmer2-doc_2.3.2+dfsg-5_all.deb 2e8d14a36fcc6970d431759cde32fcc3 425022 debug extra hmmer2-pvm-dbgsym_2.3.2+dfsg-5_amd64.deb adc424146a02578d75284a2004177b2f 99802 science optional hmmer2-pvm_2.3.2+dfsg-5_amd64.deb 8e76284d4047df5e48043d8e80c49497 7510 science optional hmmer2_2.3.2+dfsg-5_amd64.buildinfo 0fd74d9c1a54fd6e5e600d5954927d5a 1519004 science optional hmmer2_2.3.2+dfsg-5_amd64.deb 72a76bbf8f16aa33450e468d8c0fd049 101422 libdevel optional libhmmer2-dev_2.3.2+dfsg-5_amd64.deb -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAlmsXcURHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtGSBQ/+NqsSb2xzCgY5LuiXrwJYTqKfyi+uOG+/ CJqChoOrxK8ni0YEkx2tHjnXPvJ75h2AM0o7GzdcRzdifFL4tDWESWiFRPeu5z+y bzRQM9Ruz+KRBmBtTAAYX3TM4Tw2WcJWOZVnDdtCS4Fm301N5nOmsJdmOUmjJN6z W2ZT0IG98pbFIgo9iDlR7sXlqx9p8bhEvd0tVSZl1G+qicYfa/exeIkJl+sZbMiG 4qIHjDyyDtQIiH+9UxWNDp/QsfNv5XakMi9j4CE84u7mmXyJpRm6XFMtENsFDYmD /pN57VhTJVa1nRqizZsRNpEHI75Jz93FrRp+2l4x0hrYCr0e9lEimOUNwO5zf8dW +jjmwVbzzGW6h4/kAMgfesrY5cV3IOuPLZFhM8dhcYLFJGskXav70y80t99OHBxf nDM/gXWWEs2axfP5AMweapc2kNXD4ywnO1tPF1xxLncx1vvh8xSJaN4Kvdv3U2ru TY/JW/qbnd4n788ioqZPajdeZuFePDeGF/3/NJNJItiFHRaIvPVzSKN6qV4Luz7w EKN93SFWzQQHy98zTHQGRY+edOma9K6d0R0KrN3TFK9E4S+VGwMBO0rwCFgecYWK jXF7QpAmIdjjCMvtB749BCauJZ5/6nq9gaz2QbS26kgeLXYd2bx2/HCOAKLnNLQx ekCtOSw54ew= =9b3i -----END PGP SIGNATURE-----
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