Your message dated Wed, 22 Feb 2017 11:33:50 +0000
with message-id <e1cgvb8-000btp...@fasolo.debian.org>
and subject line Bug#855480: fixed in examl 3.0.18-2
has caused the Debian Bug report #855480,
regarding examl: FTBFS with bash as /bin/sh
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
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misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)
--
855480: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=855480
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: examl
Version: 3.0.18-1
Severity: serious
Tags: patch
Justification: fails to build from source
User: reproducible-bui...@lists.alioth.debian.org
Usertags: ftbfs
X-Debbugs-Cc: reproducible-b...@lists.alioth.debian.org
Dear Maintainer,
examl fails to build from source in unstable/amd64 when
/bin/sh is set to bash:
[…]
dh_auto_clean
for mfile in Makefile.AVX.gcc Makefile.OMP.AVX.gcc Makefile.OMP.SSE3.gcc
Makefile.SSE3.gcc; do /usr/bin/make --directory=examl -f ${mfile} clean ; done
make[2]: Entering directory '«BUILDDIR»/examl'
rm -f *.o examl-AVX
make[2]: Leaving directory '«BUILDDIR»/examl'
make[2]: Entering directory '«BUILDDIR»/examl'
rm -f *.o examl-OMP-AVX
make[2]: Leaving directory '«BUILDDIR»/examl'
make[2]: Entering directory '«BUILDDIR»/examl'
rm -f *.o examl-OMP
make[2]: Leaving directory '«BUILDDIR»/examl'
make[2]: Entering directory '«BUILDDIR»/examl'
rm -f *.o examl
make[2]: Leaving directory '«BUILDDIR»/examl'
/usr/bin/make --directory=parser -f Makefile.SSE3.gcc clean ; done
/bin/sh: -c: line 0: syntax error near unexpected token `done'
/bin/sh: -c: line 0: `/usr/bin/make --directory=parser -f Makefile.SSE3.gcc
clean ; done'
debian/rules:15: recipe for target 'override_dh_auto_clean' failed
make[1]: *** [override_dh_auto_clean] Error 1
make[1]: Leaving directory '«BUILDDIR»'
debian/rules:12: recipe for target 'clean' failed
make: *** [clean] Error 2
dpkg-buildpackage: error: fakeroot debian/rules clean gave error exit status 2
[…]
Patch attached.
Regards,
--
,''`.
: :' : Chris Lamb
`. `'` la...@debian.org / chris-lamb.co.uk
`-
examl.3.0.18-1.unstable.amd64.log.txt.gz
Description: Binary data
diff --git a/debian/rules b/debian/rules
index 84fa450..ad28a42 100755
--- a/debian/rules
+++ b/debian/rules
@@ -14,9 +14,9 @@ SRCDIR:=examl
override_dh_auto_clean:
dh_auto_clean
for mfile in $(MFILES); do $(MAKE) --directory=$(SRCDIR) -f $${mfile}
clean ; done
- $(MAKE) --directory=parser -f Makefile.SSE3.gcc clean ; done
+ $(MAKE) --directory=parser -f Makefile.SSE3.gcc clean
override_dh_auto_build:
dh_auto_build
for mfile in $(MFILES); do $(MAKE) --directory=$(SRCDIR) -f $${mfile} ;
done
- $(MAKE) --directory=parser -f Makefile.SSE3.gcc ; done
+ $(MAKE) --directory=parser -f Makefile.SSE3.gcc
--- End Message ---
--- Begin Message ---
Source: examl
Source-Version: 3.0.18-2
We believe that the bug you reported is fixed in the latest version of
examl, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 855...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Andreas Tille <ti...@debian.org> (supplier of updated examl package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Wed, 22 Feb 2017 12:06:12 +0100
Source: examl
Binary: examl
Architecture: source amd64
Version: 3.0.18-2
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<debian-med-packag...@lists.alioth.debian.org>
Changed-By: Andreas Tille <ti...@debian.org>
Description:
examl - Exascale Maximum Likelihood (ExaML) code for phylogenetic inferen
Closes: 855430 855480
Changes:
examl (3.0.18-2) unstable; urgency=medium
.
* Fix cut-n-pasto in d/rules (thanks for the patch to Chris Lamb
<la...@debian.org>)
Closes: #855480
* Restrict build to intel architectures
Closes: #855430
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examl_3.0.18-2_amd64.deb
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