Your message dated Tue, 08 Nov 2016 17:34:55 +0000 with message-id <[email protected]> and subject line Bug#843628: fixed in libmems 1.6.0+4725-4 has caused the Debian Bug report #843628, regarding libmems: FTBFS with Boost 1.62 to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact [email protected] immediately.) -- 843628: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=843628 Debian Bug Tracking System Contact [email protected] with problems
--- Begin Message ---Source: libmems Version: 1.6.0+4725-3 Severity: serious Tags: patch Hi Maintainer libmems FTBFS with Boost 1.62 and outputs the following error: In file included from ../libMems/AbstractMatch.h:19:0, from ../libMems/UngappedLocalAlignment.h:18, from ../libMems/Match.h:19, from ../libMems/MatchFinder.h:17, from ../libMems/MemHash.h:20, from ../libMems/RepeatHash.h:16, from RepeatHash.cpp:13: /usr/include/boost/type_traits/remove_pointer.hpp:21:21: error: missing binary operator before token "(" #if BOOST_WORKAROUND(BOOST_MSVC, < 1900) ^ The attached patch adds a missing include so that BOOST_WORKAROUND is defined. Regards GrahamDescription: Fix FTBFS with Boost 1.62 Add missing include so that BOOST_WORKAROUND is defined. Author: Graham Inggs <[email protected]> Last-Update: 2016-11-08 --- a/libMems/AbstractMatch.h +++ b/libMems/AbstractMatch.h @@ -16,6 +16,7 @@ #include "libGenome/gnClone.h" #include <vector> #include <algorithm> +#include <boost/detail/workaround.hpp> #include <boost/type_traits/remove_pointer.hpp> #include <boost/type_traits/add_pointer.hpp> #include <boost/dynamic_bitset.hpp>
--- End Message ---
--- Begin Message ---Source: libmems Source-Version: 1.6.0+4725-4 We believe that the bug you reported is fixed in the latest version of libmems, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to [email protected], and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Andreas Tille <[email protected]> (supplier of updated libmems package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing [email protected]) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 1.8 Date: Tue, 08 Nov 2016 14:16:07 +0100 Source: libmems Binary: libmems-1.6-dev libmems-1.6-1v5 Architecture: source amd64 Version: 1.6.0+4725-4 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team <[email protected]> Changed-By: Andreas Tille <[email protected]> Description: libmems-1.6-1v5 - library to support DNA string matching and comparative genomics libmems-1.6-dev - development library to support DNA string matching and comparativ Closes: 843628 Changes: libmems (1.6.0+4725-4) unstable; urgency=medium . * Use fake watch file * Add missing include so that BOOST_WORKAROUND is defined (thanks to (Graham Inggs <[email protected]> for the patch) Closes: #843628 * Add patch to really drop explicit version in package names but do not activate the patch due to transition freeze Checksums-Sha1: ad765bdd0bdaa41619209d10c5278fdec2de8871 2193 libmems_1.6.0+4725-4.dsc 4bb497bffb2138792a6d66a3a2a93257863b0608 7856 libmems_1.6.0+4725-4.debian.tar.xz 841c750ebd95193c52ba6b80e4bdc707bbc9ed60 7868260 libmems-1.6-1v5-dbgsym_1.6.0+4725-4_amd64.deb 85484a59042b1384e650fce3f99c632f3ca6325d 643748 libmems-1.6-1v5_1.6.0+4725-4_amd64.deb c48876f4c21a0c6fb9130d7ed948059d8a2ebca0 919094 libmems-1.6-dev_1.6.0+4725-4_amd64.deb c17da18bdceebd4b549afdb4fe4f533563fa5165 6170 libmems_1.6.0+4725-4_20161108T171259z-c34688ca.buildinfo Checksums-Sha256: 8090e4497123f4beb721df9b374e20d8fcc374d6d02d4436e1bc0905aa881de8 2193 libmems_1.6.0+4725-4.dsc b22b2292547d63f004032ac960ca89ef581d4ee2d71b6ca6a103f4b73491aecd 7856 libmems_1.6.0+4725-4.debian.tar.xz eb323dffae3605d59f03503e91d3f46e46030405c80abaf0315afcc3dc5353a3 7868260 libmems-1.6-1v5-dbgsym_1.6.0+4725-4_amd64.deb 3759e22eff59324802bc51091cde960b9f148f6d43178ec6e54a0a8cda18ae82 643748 libmems-1.6-1v5_1.6.0+4725-4_amd64.deb 0c8db1098de159006adc7900aa712b5bd32c7bdfe3c6dcf7b792520268b645b6 919094 libmems-1.6-dev_1.6.0+4725-4_amd64.deb 88cdbc09512b463caa8bc51c172df3a3f2f5acc1e7d8a1ca8168e09d35d178c0 6170 libmems_1.6.0+4725-4_20161108T171259z-c34688ca.buildinfo Files: e0a9001ec491c82af55904c6eeed41ca 2193 science optional libmems_1.6.0+4725-4.dsc f75058ea2f982e39bec1e02769da5d58 7856 science optional libmems_1.6.0+4725-4.debian.tar.xz 44b476c62aab2c921b0db55af5bb6f29 7868260 debug extra libmems-1.6-1v5-dbgsym_1.6.0+4725-4_amd64.deb aebe9bbdc1c23ecf0feadd0ec295f9eb 643748 libs optional libmems-1.6-1v5_1.6.0+4725-4_amd64.deb adf8474d7e8e6ca287a482a71e8c884e 919094 libdevel optional libmems-1.6-dev_1.6.0+4725-4_amd64.deb c34688caeb592ed540b8bd5a25965e08 6170 science optional libmems_1.6.0+4725-4_20161108T171259z-c34688ca.buildinfo -----BEGIN PGP SIGNATURE----- Version: GnuPG v1 iQIcBAEBCAAGBQJYIgkVAAoJEFeKBJTRxkbRmXsQAJoyzJrJeZYEzpAyOgZajxbQ IIhxFV6sLuUXYul+bvQ1pECyeOxe56nLFv0Dt907PLWIVzrhp2c1KjSjkEWfBl/3 sMAXSKfdTJAKDBLKE2wtQRnN7HLbN2OTXkXPvqAXoBX+ZcEyF+noSsfAh8n41Y3W isOau3dkYyXNBrr5NDXkwYo/Nx8b6JdBHd87jVfMtthK2B2GHnlPI2ShSDbaJc5O GZnvRgORJtCq7UANoHa2cAesaHbnXnKmy1DRwwQEMta3D/x/sGWF41hW6RixfHdM r/HYuywjQtlhC5x/az96uDyvxsOOJIhAieLaKeTQzjod+ds4de+/F10x7pqnPtbl lprcd0KqzTMd3ATJPPhaNSUK4Nf3ly5SVJ56kCzhhSNmCNOB5Gz9RARYUfbR5iI6 RGOm47vg2/E0GjfZou4gCh2FgYD4MYCihTdu4+0LQu4UeI56BLOUYp+zr0WVLyDu msJ3VuBcMHWgEAj4idGzhk8w2lIRz/VUZRX98pJRTd9d6OfIoQMSQisvTAFOgwJT jZjNPjeIBmhD90MR01l6SX6kWCA7uNwAayk8VPB5UuJBtthRjhvLdjsGeTecKbDn gjdLDlIGgIwZTNWlJKN8hVr87z/57ff1GYjExtuw4NNk9V2Hzk7aZUr/VMQ6GwjO SIfnk/qmZT4TlXz5Qx7D =6Pyq -----END PGP SIGNATURE-----
--- End Message ---
