Your message dated Mon, 08 Feb 2016 01:20:01 +0000 with message-id <[email protected]> and subject line Bug#812700: fixed in nitime 0.6-1 has caused the Debian Bug report #812700, regarding nitime: FTBFS - TypeError: Cannot cast ufunc subtract output from dtype('float64') to dtype('<i2') to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact [email protected] immediately.) -- 812700: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=812700 Debian Bug Tracking System Contact [email protected] with problems
--- Begin Message ---Package: nitime Version: 0.5-3 Severity: serious Usertags: goto-cc During a rebuild of all Debian packages in a clean sid chroot (using cowbuilder and pbuilder) the build failed with the following error. [...] /usr/bin/make -C doc html make[2]: Entering directory '/srv/jenkins-slave/workspace/sid-goto-cc-nitime/nitime-0.5/doc' ../tools/make_examples.py /usr/lib/python2.7/dist-packages/matplotlib/font_manager.py:273: UserWarning: Matplotlib is building the font cache using fc-list. This may take a moment. warnings.warn('Matplotlib is building the font cache using fc-list. This may take a moment.') /usr/lib/python2.7/dist-packages/numpy/core/numeric.py:474: ComplexWarning: Casting complex values to real discards the imaginary part return array(a, dtype, copy=False, order=order) /usr/lib/python2.7/dist-packages/matplotlib/axes/_axes.py:4670: ComplexWarning: Casting complex values to real discards the imaginary part X[0] = start /usr/lib/python2.7/dist-packages/matplotlib/axes/_axes.py:4671: ComplexWarning: Casting complex values to real discards the imaginary part X[N + 1] = end /usr/lib/python2.7/dist-packages/matplotlib/axes/_axes.py:4674: ComplexWarning: Casting complex values to real discards the imaginary part X[1:N + 1, 1] = y1slice /usr/lib/python2.7/dist-packages/matplotlib/axes/_axes.py:4676: ComplexWarning: Casting complex values to real discards the imaginary part X[N + 2:, 1] = y2slice[::-1] /srv/jenkins-slave/workspace/sid-goto-cc-nitime/nitime-0.5/debian/tmp/usr/lib/python2.7/dist-packages/nitime/viz.py:1391: RuntimeWarning: divide by zero encountered in log toplot = np.log(toplot) /usr/lib/python2.7/dist-packages/scipy/signal/filter_design.py:2839: RuntimeWarning: divide by zero encountered in true_divide (stopb * (passb[0] - passb[1]))) freqs: [ 0.02217944 0.02897103 0.05012797] estimated: [ 0.02218628 0.02897644 0.05012512] err: 8.410e-11 amp: [ 1.14652768 1.5882896 0.77338958] estimated: [ 1.13804782 1.59692699 0.76345026] err: 5.531e-05 phase: [ 3.28272585 4.84241539 1.8610345 ] estimated: [ 3.07380887 4.66664496 1.98370608] err: 8.959e-02 MS error over noise: 2.350e-02 Traceback (most recent call last): File "../tools/make_examples.py", line 96, in <module> execfile(script) File "filtering_fmri.py", line 387, in <module> filt_order=10)) File "/srv/jenkins-slave/workspace/sid-goto-cc-nitime/nitime-0.5/debian/tmp/usr/lib/python2.7/dist-packages/nitime/fmri/io.py", line 108, in time_series_from_file filter, normalize, average) File "/srv/jenkins-slave/workspace/sid-goto-cc-nitime/nitime-0.5/debian/tmp/usr/lib/python2.7/dist-packages/nitime/fmri/io.py", line 202, in _tseries_from_nifti_helper tseries = F.fir File "/srv/jenkins-slave/workspace/sid-goto-cc-nitime/nitime-0.5/debian/tmp/usr/lib/python2.7/dist-packages/nitime/descriptors.py", line 140, in __get__ val = self.getter(obj) File "/srv/jenkins-slave/workspace/sid-goto-cc-nitime/nitime-0.5/debian/tmp/usr/lib/python2.7/dist-packages/nitime/analysis/spectral.py", line 381, in fir sig = self.filtfilt(b, a, sig) File "/srv/jenkins-slave/workspace/sid-goto-cc-nitime/nitime-0.5/debian/tmp/usr/lib/python2.7/dist-packages/nitime/analysis/spectral.py", line 328, in filtfilt out_data[i] -= np.mean(out_data[i]) TypeError: Cannot cast ufunc subtract output from dtype('float64') to dtype('<i2') with casting rule 'same_kind' Makefile:79: recipe for target 'rstexamples' failed make[2]: *** [rstexamples] Error 1 The full build log is attached; please do let me know if the problem is unreproducible, in which case I shall try to investigate further. Best, Michael
nitime-build-log.txt.gz
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--- Begin Message ---Source: nitime Source-Version: 0.6-1 We believe that the bug you reported is fixed in the latest version of nitime, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to [email protected], and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Yaroslav Halchenko <[email protected]> (supplier of updated nitime package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing [email protected]) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 1.8 Date: Sun, 07 Feb 2016 18:57:21 -0500 Source: nitime Binary: python-nitime python-nitime-doc Architecture: source all Version: 0.6-1 Distribution: unstable Urgency: medium Maintainer: NeuroDebian Team <[email protected]> Changed-By: Yaroslav Halchenko <[email protected]> Description: python-nitime - timeseries analysis for neuroscience data (nitime) python-nitime-doc - timeseries analysis for neuroscience data (nitime) -- documentati Closes: 812700 Changes: nitime (0.6-1) unstable; urgency=medium . * Fresh upstream bugfix release (Closes: #812700) * debian/patches -- dropped 2 patches previously picked up from upstream VCS * debian/watch -- adjusted for deprecated githubredir Checksums-Sha1: 4361ca7965d356eee34a83f5f0d4ad355977a513 2068 nitime_0.6-1.dsc 71e12c5af8c5c35e2242e7342693d3154f48782f 6205960 nitime_0.6.orig.tar.gz a3fea9a975f90272d6ac1c01c813ffc824b6400c 6464 nitime_0.6-1.debian.tar.xz fb6badef529a415db497f7cc70c4c0de950a42d6 5723202 python-nitime-doc_0.6-1_all.deb 62703708dad62bf3b9e4b98f31143387a7b6027c 2559688 python-nitime_0.6-1_all.deb Checksums-Sha256: 2df85356c71f98c8a905eeca524065e5bc4b680534e830c2a9e1adc66be8832a 2068 nitime_0.6-1.dsc 7ad41ce89fabe7298e29440a0f096f79401b1ec7a22ef9375da1ca1ef00c3adb 6205960 nitime_0.6.orig.tar.gz f8b8e2ca6964b0a0962b9874d400b14cb26c6a4c0df0595e2c9610dfc48bfe6a 6464 nitime_0.6-1.debian.tar.xz de1447c9dd5a72b0adec1a8022541fe36518c75728ed92e540a6e733ff35a137 5723202 python-nitime-doc_0.6-1_all.deb 93e2cd27b5d051149975aefd8922e7b01cb444f01af846377c48a32d14527fe0 2559688 python-nitime_0.6-1_all.deb Files: de48b35efb1c5c938617e6c284f7fe9d 2068 python extra nitime_0.6-1.dsc 4a5d65257305b2dceaa28bcaaf4934f5 6205960 python extra nitime_0.6.orig.tar.gz 2205e4c9c43a4733f992a99f75b2a417 6464 python extra nitime_0.6-1.debian.tar.xz 70dd635ceef8617190de1b92f9fffcdc 5723202 doc extra python-nitime-doc_0.6-1_all.deb cb09596d3d39c03ae1009594c33c2fce 2559688 python extra python-nitime_0.6-1_all.deb -----BEGIN PGP SIGNATURE----- Version: GnuPG v1 iQIcBAEBCAAGBQJWt+ZzAAoJEKLeI1Bi2jP6CqoQAMxEE9qUI0FoP+XgPgYb8bmF WoH+M4Wpqfu5vBfmpKfjJqW8d3+LhDhrrHPAkWHpMsMgGx+liThe9AgBqKhr1y2x sMcvR5yXrYAZ+m1my/LTtqVcm7HA83DahWxCnp3n29wiU2CAKvmfoM117XUTCu35 SznVLYmFtILLlNlMf80E8+jzQDMu4RHltDiw3ZAT3ckQFqhwkp33XqJIf0lJbpPv yG1s1ygumb5fKGVcC2U7cFMR23DE7IEPcjwd1sCSOiBHNKWLi5ZJeeCJiSyak2DA f6Ym9OHL/VgO/KFOft0lauSRqbSyKrs7X2c9EVMaMkkyIKXZWZNMghVAVMUfm/Li QJYXq4gMsMGZq1evHtc6TRDV2hT/R01bzutKwK7NhcD/KwSgqX+zMEMJQQSqG0dZ zdA+x9rUj4T9n4YZD+JzO02uQqyQSVXYTsSIj2hLA64WhQ3Jj7qn4teIYXI0nQIp 77/GUv5buYmbsCoDsw1usu6tUqlR7bm1LJLEUodgTDttxhDtbVLnnT8RE/fXtjOR RKwhdNJqg2SwnMSnZE5ksBemB3Sv8WCVzSQiAWz3qXndaXQm/EcsJjLrWJqtGNaV zylpLD1u8pTf5S7yA/HYtgjFITBpWnVAq478xq2mYskIEOJln0A/1WVRXUpPGrIO icv2A2CkIATXm3fz3EgA =uo0O -----END PGP SIGNATURE-----
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