Your message dated Tue, 17 Sep 2013 18:33:27 +0000
with message-id <[email protected]>
and subject line Bug#722666: fixed in mpich 3.0.4-3
has caused the Debian Bug report #722666,
regarding libmpich1.0-dev and libmpich-dev: error when trying to install
together
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact [email protected]
immediately.)
--
722666: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=722666
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: libmpich-dev,libmpich1.0-dev
Version: libmpich-dev/3.0.4-2
Version: libmpich1.0-dev/1.2.7-10
Severity: serious
User: [email protected]
Usertags: edos-file-overwrite
Date: 2013-09-13
Architecture: amd64
Distribution: sid
Hi,
automatic installation tests of packages that share a file and at the
same time do not conflict by their package dependency relationships has
detected the following problem:
WARNING: The following packages cannot be authenticated!
libasan0 libatomic1 libgmp10 libisl10 libcloog-isl4 libquadmath0
libgfortran3 libgomp1 libitm1 libmpfr4 libtsan0 libxau6 libxdmcp6 libxcb1
libx11-data libx11-6 libmpc3 libcr0 libmpich10 binutils cpp-4.8 cpp
libgcc-4.8-dev gcc-4.8 gcc libc-dev-bin linux-libc-dev libc6-dev
libstdc++-4.8-dev g++-4.8 g++ libgfortran-4.8-dev gfortran-4.8 gfortran
libcr-dev libmpich-dev libmpich1.0gf libmpich1.0-dev
Extracting templates from packages: 78%
Extracting templates from packages: 100%
Authentication warning overridden.
Selecting previously unselected package libasan0:amd64.
(Reading database ... 10882 files and directories currently installed.)
Unpacking libasan0:amd64 (from .../libasan0_4.8.1-10_amd64.deb) ...
Selecting previously unselected package libatomic1:amd64.
Unpacking libatomic1:amd64 (from .../libatomic1_4.8.1-10_amd64.deb) ...
Selecting previously unselected package libgmp10:amd64.
Unpacking libgmp10:amd64 (from .../libgmp10_2%3a5.1.2+dfsg-2_amd64.deb) ...
Selecting previously unselected package libisl10:amd64.
Unpacking libisl10:amd64 (from .../libisl10_0.11.2-1_amd64.deb) ...
Selecting previously unselected package libcloog-isl4:amd64.
Unpacking libcloog-isl4:amd64 (from .../libcloog-isl4_0.18.0-2_amd64.deb) ...
Selecting previously unselected package libquadmath0:amd64.
Unpacking libquadmath0:amd64 (from .../libquadmath0_4.8.1-10_amd64.deb) ...
Selecting previously unselected package libgfortran3:amd64.
Unpacking libgfortran3:amd64 (from .../libgfortran3_4.8.1-10_amd64.deb) ...
Selecting previously unselected package libgomp1:amd64.
Unpacking libgomp1:amd64 (from .../libgomp1_4.8.1-10_amd64.deb) ...
Selecting previously unselected package libitm1:amd64.
Unpacking libitm1:amd64 (from .../libitm1_4.8.1-10_amd64.deb) ...
Selecting previously unselected package libmpfr4:amd64.
Unpacking libmpfr4:amd64 (from .../libmpfr4_3.1.1-1_amd64.deb) ...
Selecting previously unselected package libtsan0:amd64.
Unpacking libtsan0:amd64 (from .../libtsan0_4.8.1-10_amd64.deb) ...
Selecting previously unselected package libxau6:amd64.
Unpacking libxau6:amd64 (from .../libxau6_1%3a1.0.8-1_amd64.deb) ...
Selecting previously unselected package libxdmcp6:amd64.
Unpacking libxdmcp6:amd64 (from .../libxdmcp6_1%3a1.1.1-1_amd64.deb) ...
Selecting previously unselected package libxcb1:amd64.
Unpacking libxcb1:amd64 (from .../libxcb1_1.9.1-3_amd64.deb) ...
Selecting previously unselected package libx11-data.
Unpacking libx11-data (from .../libx11-data_2%3a1.6.1-1_all.deb) ...
Selecting previously unselected package libx11-6:amd64.
Unpacking libx11-6:amd64 (from .../libx11-6_2%3a1.6.1-1_amd64.deb) ...
Selecting previously unselected package libmpc3:amd64.
Unpacking libmpc3:amd64 (from .../libmpc3_1.0.1-1_amd64.deb) ...
Selecting previously unselected package libcr0.
Unpacking libcr0 (from .../libcr0_0.8.5-2_amd64.deb) ...
Selecting previously unselected package libmpich10:amd64.
Unpacking libmpich10:amd64 (from .../libmpich10_3.0.4-2_amd64.deb) ...
Selecting previously unselected package binutils.
Unpacking binutils (from .../binutils_2.23.52.20130828-1_amd64.deb) ...
Selecting previously unselected package cpp-4.8.
Unpacking cpp-4.8 (from .../cpp-4.8_4.8.1-10_amd64.deb) ...
Selecting previously unselected package cpp.
Unpacking cpp (from .../cpp_4%3a4.8.1-3_amd64.deb) ...
Selecting previously unselected package libgcc-4.8-dev:amd64.
Unpacking libgcc-4.8-dev:amd64 (from .../libgcc-4.8-dev_4.8.1-10_amd64.deb) ...
Selecting previously unselected package gcc-4.8.
Unpacking gcc-4.8 (from .../gcc-4.8_4.8.1-10_amd64.deb) ...
Selecting previously unselected package gcc.
Unpacking gcc (from .../gcc_4%3a4.8.1-3_amd64.deb) ...
Selecting previously unselected package libc-dev-bin.
Unpacking libc-dev-bin (from .../libc-dev-bin_2.17-92+b1_amd64.deb) ...
Selecting previously unselected package linux-libc-dev:amd64.
Unpacking linux-libc-dev:amd64 (from .../linux-libc-dev_3.10.11-1_amd64.deb) ...
Selecting previously unselected package libc6-dev:amd64.
Unpacking libc6-dev:amd64 (from .../libc6-dev_2.17-92+b1_amd64.deb) ...
Selecting previously unselected package libstdc++-4.8-dev:amd64.
Unpacking libstdc++-4.8-dev:amd64 (from
.../libstdc++-4.8-dev_4.8.1-10_amd64.deb) ...
Selecting previously unselected package g++-4.8.
Unpacking g++-4.8 (from .../g++-4.8_4.8.1-10_amd64.deb) ...
Selecting previously unselected package g++.
Unpacking g++ (from .../g++_4%3a4.8.1-3_amd64.deb) ...
Selecting previously unselected package libgfortran-4.8-dev:amd64.
Unpacking libgfortran-4.8-dev:amd64 (from
.../libgfortran-4.8-dev_4.8.1-10_amd64.deb) ...
Selecting previously unselected package gfortran-4.8.
Unpacking gfortran-4.8 (from .../gfortran-4.8_4.8.1-10_amd64.deb) ...
Selecting previously unselected package gfortran.
Unpacking gfortran (from .../gfortran_4%3a4.8.1-3_amd64.deb) ...
Selecting previously unselected package libcr-dev.
Unpacking libcr-dev (from .../libcr-dev_0.8.5-2_amd64.deb) ...
Selecting previously unselected package libmpich-dev.
Unpacking libmpich-dev (from .../libmpich-dev_3.0.4-2_amd64.deb) ...
Selecting previously unselected package libmpich1.0gf.
Unpacking libmpich1.0gf (from .../libmpich1.0gf_1.2.7-10_amd64.deb) ...
Selecting previously unselected package libmpich1.0-dev.
Unpacking libmpich1.0-dev (from .../libmpich1.0-dev_1.2.7-10_amd64.deb) ...
dpkg: error processing
/var/cache/apt/archives/libmpich1.0-dev_1.2.7-10_amd64.deb (--unpack):
trying to overwrite '/usr/share/man/man1/mpif90.mpich.1.gz', which is also in
package libmpich-dev 3.0.4-2
Processing triggers for man-db ...
Errors were encountered while processing:
/var/cache/apt/archives/libmpich1.0-dev_1.2.7-10_amd64.deb
E: Sub-process /usr/bin/dpkg returned an error code (1)
This is a serious bug as it makes installation fail, and violates
sections 7.6.1 and 10.1 of the policy. An optimal solution would
consist in only one of the packages installing that file, and renaming
or removing the file in the other package. Depending on the
circumstances you might also consider Replace relations or file
diversions. If the conflicting situation cannot be resolved then, as a
last resort, the two packages have to declare a mutual
Conflict. Please take into account that Replaces, Conflicts and
diversions should only be used when packages provide different
implementations for the same functionality.
Here is a list of files that are known to be shared by both packages
(according to the Contents file for sid/amd64, which may be
slightly out of sync):
/usr/bin/mpicc.mpich
/usr/bin/mpicxx.mpich
/usr/bin/mpif77.mpich
/usr/bin/mpif90.mpich
/usr/share/man/man1/mpicc.mpich.1.gz
/usr/share/man/man1/mpicxx.mpich.1.gz
/usr/share/man/man1/mpif77.mpich.1.gz
/usr/share/man/man1/mpif90.mpich.1.gz
This bug has been filed against both packages. If you, the maintainers of
the two packages in question, have agreed on which of the packages will
resolve the problem please reassign the bug to that package. You may then
also register in the BTS that the other package is affected by the bug.
-Ralf.
PS: for more information about the detection of file overwrite errors
of this kind see http://edos.debian.net/file-overwrites/.
--- End Message ---
--- Begin Message ---
Source: mpich
Source-Version: 3.0.4-3
We believe that the bug you reported is fixed in the latest version of
mpich, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Anton Gladky <[email protected]> (supplier of updated mpich package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1
Format: 1.8
Date: Tue, 17 Sep 2013 19:42:55 +0200
Source: mpich
Binary: libmpich-dev libmpich10 libmpich2-dev mpich mpich-doc mpich2 mpich2-doc
Architecture: source amd64 all
Version: 3.0.4-3
Distribution: unstable
Urgency: low
Maintainer: Debian Science Maintainers
<[email protected]>
Changed-By: Anton Gladky <[email protected]>
Description:
libmpich-dev - Development files for MPICH
libmpich10 - Shared libraries for MPICH
libmpich2-dev - Transitional dummy package for MPICH development files
mpich - Implementation of the MPI Message Passing Interface standard
mpich-doc - Documentation for MPICH
mpich2 - Transitional dummy package
mpich2-doc - Transitional dummy package for MPICH documentation
Closes: 722666 722667
Changes:
mpich (3.0.4-3) unstable; urgency=low
.
* [090aeef] Add Break/Replaces for libmpich1.0-dev. (Closes: #722666)
* [abf7347] Add Break/Replaces for mpich-bin. (Closes: #722667)
Checksums-Sha1:
a813693863b210c14d052d538b3ff0c2869f4897 2539 mpich_3.0.4-3.dsc
024fd0ce16939d23ebafa366f3fb1f6cb091b65e 56307 mpich_3.0.4-3.debian.tar.gz
8c77cd353ac2a5a7e6faefcdc90849bf1079cf46 896364 libmpich-dev_3.0.4-3_amd64.deb
d9d92b004f66558e1acad9b0262a68b3e8cfda0e 805058 libmpich10_3.0.4-3_amd64.deb
1e4204ff01407c620d53184689e8824297db3f26 26024 libmpich2-dev_3.0.4-3_amd64.deb
31f91ec739b5fe2ed0231799447acfeec71036ef 199532 mpich_3.0.4-3_amd64.deb
6ec6ca1aa25ca1f853f2bff4bceb4ada9b365fd7 739990 mpich-doc_3.0.4-3_all.deb
872d60c95e02e7c04fb40872c5b76e5289b380cc 25990 mpich2_3.0.4-3_amd64.deb
e43683125a325ee5984acff77a5d0f461e5fc60d 26004 mpich2-doc_3.0.4-3_all.deb
Checksums-Sha256:
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mpich_3.0.4-3.dsc
ccec3b7e6ac3ffcba05e936b1fcecaf199a23fce1b7acb6d2cf4c9b729978cee 56307
mpich_3.0.4-3.debian.tar.gz
11e71006ebbb4e8c3d7e9609cd159cdaf0a86bdf642b0a5f9f0e4cf154f5c97f 896364
libmpich-dev_3.0.4-3_amd64.deb
60e0bf803816028d8fc7fca704f7cc8973cb5bc1fa55d4fd2da099eeaa5d07eb 805058
libmpich10_3.0.4-3_amd64.deb
144865bfc9dbc96bb7c8b4794b669f1b2b0d0746cd422745a1da2ce3403eaadc 26024
libmpich2-dev_3.0.4-3_amd64.deb
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mpich_3.0.4-3_amd64.deb
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mpich-doc_3.0.4-3_all.deb
ab037b1ca4b44810e42dff7e58a08db5032685012ddd632233c77b2fadc8aaf5 25990
mpich2_3.0.4-3_amd64.deb
e10a23ea9a38d22af72a46e18a4ae2af101e6fc94626eda5c785acad3fb8fd62 26004
mpich2-doc_3.0.4-3_all.deb
Files:
d5c32a14c4a1d58af75d78f19e2d2ce6 2539 devel extra mpich_3.0.4-3.dsc
3a90d484f38e5d855994d3aa3abd4536 56307 devel extra mpich_3.0.4-3.debian.tar.gz
a8f80349eed1e000532056cf3a30622a 896364 libdevel extra
libmpich-dev_3.0.4-3_amd64.deb
b3609fd9b42c352d2fdf33b8eed6d42e 805058 libs extra libmpich10_3.0.4-3_amd64.deb
da48bb4bf0fb30364a9a6978d3cfcaad 26024 libdevel extra
libmpich2-dev_3.0.4-3_amd64.deb
dee74033abf7cd0bb1341b33789e8a0a 199532 devel extra mpich_3.0.4-3_amd64.deb
34c90a4dc75934a2b2cf78e74fc9ad94 739990 doc extra mpich-doc_3.0.4-3_all.deb
87788a68bd2d50be65ca11502057e766 25990 devel extra mpich2_3.0.4-3_amd64.deb
2caefc5a3dfcd53edefab58c4ed5fc34 26004 doc extra mpich2-doc_3.0.4-3_all.deb
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