Your message dated Fri, 03 Sep 2010 20:32:17 +0000
with message-id <e1orcvp-0006oo...@franck.debian.org>
and subject line Bug#592242: fixed in fsl 4.1.6-4
has caused the Debian Bug report #592242,
regarding fsl and cyrus-clients-2.2: error when trying to install together
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)
--
592242: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=592242
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: cyrus-clients-2.2,fsl
Version: cyrus-clients-2.2/2.2.13-19
Version: fsl/4.1.6-2
Severity: serious
User: trei...@debian.org
Usertags: edos-file-overwrite
Date: 2010-08-08
Architecture: amd64
Distribution: sid
Hi,
automatic installation tests of packages that share a file and at the
same time do not conflict by their package dependency relationships has
detected the following problem:
WARNING: The following packages cannot be authenticated!
x11-common bc dc libpcre3 libxml2 ucf defoma libfreetype6 ttf-dejavu-core
fontconfig-config libfontconfig1 fontconfig libjpeg62 libpng12-0
libgd2-noxpm libgdchart-gd2-noxpm libnewmat10ldbl libnifti2 libasound2
libglib2.0-0 libatk1.0-0 libpixman-1-0 libxau6 libxdmcp6 libxcb1 libx11-data
libx11-6 libxcb-render0 libxcb-render-util0 libxrender1 libcairo2
libdbus-1-3 libgtk2.0-common libavahi-common-data libavahi-common3
libavahi-client3 libcups2 libjasper1 libpango1.0-common libdatrie1
libthai-data libthai0 libxft2 libpango1.0-0 libtiff4 libxext6 libxfixes3
libxcomposite1 libxcursor1 libxdamage1 libxi6 libxinerama1 libxrandr2
shared-mime-info libgtk2.0-0 libhunspell-1.2-0 libnspr4-0d libmozjs2d
libnss3-1d libice6 libsm6 libxcb-atom1 libxcb-aux0 libxcb-event1
libstartup-notification0 libxt6 xulrunner-1.9.1 conkeror tcsh tcl8.4 tk8.4
libaudio2 liblcms1 libmng1 libqt3-mt libqwt4c2 libavutil49 libdirac-encoder0
libfaad2 libgsm1 libopenjpeg2 liborc-0.4-0 libschroedinger-1.0-0 libspeex1
libogg0 libtheora0 libvorbis0a libvorbisenc2 libavcodec52 libavformat52
libdrm2 libxxf86vm1 libgl1-mesa-glx libgl2ps0 mysql-common libmysqlclient16
libgfortran3 libibverbs1 libnuma1 libopenmpi1.3 libpq5 libswscale0 libxss1
libvtk5.4 libvtk5.4-qt3 fslview fsl-4.1 fsl libroken18-heimdal
libasn1-8-heimdal libwind0-heimdal libhx509-5-heimdal libkrb5-26-heimdal
libheimntlm0-heimdal libgssapi2-heimdal cyrus-clients-2.2
Extracting templates from packages: 25%
Extracting templates from packages: 51%
Extracting templates from packages: 77%
Extracting templates from packages: 100%
Preconfiguring packages ...
Authentication warning overridden.
Can not write log, openpty() failed (/dev/pts not mounted?)
Selecting previously deselected package x11-common.
(Reading database ... 12247 files and directories currently installed.)
Unpacking x11-common (from .../x11-common_1%3a7.5+6_all.deb) ...
Selecting previously deselected package bc.
Unpacking bc (from .../bc_1.06.95-2_amd64.deb) ...
Selecting previously deselected package dc.
Unpacking dc (from .../dc_1.06.95-2_amd64.deb) ...
Selecting previously deselected package libpcre3.
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Selecting previously deselected package libxml2.
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Selecting previously deselected package ucf.
Unpacking ucf (from .../archives/ucf_3.0025_all.deb) ...
Moving old data out of the way
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Selecting previously deselected package libgd2-noxpm.
Unpacking libgd2-noxpm (from .../libgd2-noxpm_2.0.36~rc1~dfsg-3.2_amd64.deb) ...
Selecting previously deselected package libgdchart-gd2-noxpm.
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.../libgdchart-gd2-noxpm_0.11.5-6_amd64.deb) ...
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Selecting previously deselected package libxau6.
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...
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Selecting previously deselected package cyrus-clients-2.2.
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dpkg: error processing
/var/cache/apt/archives/cyrus-clients-2.2_2.2.13-19_amd64.deb (--unpack):
trying to overwrite '/usr/bin/imtest', which is also in package fsl 0:4.1.6-2
dpkg-deb: subprocess paste killed by signal (Broken pipe)
Processing triggers for man-db ...
Processing triggers for install-info ...
Errors were encountered while processing:
/var/cache/apt/archives/cyrus-clients-2.2_2.2.13-19_amd64.deb
E: Sub-process /usr/bin/dpkg returned an error code (1)
This is a serious bug as it makes installation fail, and violates
sections 7.6.1 and 10.1 of the policy. An optimal solution would
consist in only one of the packages installing that file, and renaming
or removing the file in the other package. Depending on the
circumstances you might also consider Replace relations or file
diversions. If the conflicting situation cannot be resolved then, as a
last resort, the two packages have to declare a mutual
Conflict. Please take into account that Replaces, Conflicts and
diversions should only be used when packages provide different
implementations for the same functionality.
Here is a list of files that are known to be shared by both packages
(according to the Contents file for sid/amd64, which may be
slightly out of sync):
/usr/bin/imtest
/usr/share/man/man1/imtest.1.gz
This bug is assigned to both packages. If you, the maintainers of
the two packages in question, have agreed on which of the packages will
resolve the problem please reassign the bug to that package.
-Ralf.
PS: for more information about the detection of file overwrite errors
of this kind see http://edos.debian.net/file-overwrites/.
--- End Message ---
--- Begin Message ---
Source: fsl
Source-Version: 4.1.6-4
We believe that the bug you reported is fixed in the latest version of
fsl, which is due to be installed in the Debian FTP archive:
fsl-4.1_4.1.6-4_amd64.deb
to non-free/f/fsl/fsl-4.1_4.1.6-4_amd64.deb
fsl-doc-4.1_4.1.6-4_all.deb
to non-free/f/fsl/fsl-doc-4.1_4.1.6-4_all.deb
fsl_4.1.6-4.debian.tar.gz
to non-free/f/fsl/fsl_4.1.6-4.debian.tar.gz
fsl_4.1.6-4.dsc
to non-free/f/fsl/fsl_4.1.6-4.dsc
fsl_4.1.6-4_all.deb
to non-free/f/fsl/fsl_4.1.6-4_all.deb
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 592...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Michael Hanke <michael.ha...@gmail.com> (supplier of updated fsl package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1
Format: 1.8
Date: Fri, 03 Sep 2010 09:35:39 -0400
Source: fsl
Binary: fsl fsl-4.1 fsl-doc-4.1
Architecture: source amd64 all
Version: 4.1.6-4
Distribution: unstable
Urgency: low
Maintainer: NeuroDebian Team <t...@neuro.debian.net>
Changed-By: Michael Hanke <michael.ha...@gmail.com>
Description:
fsl - Metapackage for the latest version of FSL
fsl-4.1 - analysis tools for FMRI, MRI and DTI brain imaging
fsl-doc-4.1 - documentation for FSL
Closes: 592242
Changes:
fsl (4.1.6-4) unstable; urgency=low
.
* Remove /usr/bin symlinks from 'fsl' package and remove now obsolete
package conflicts (Closes: #592242 again). Instead, the 'fsl-4.1' package
now installs properly prefixed ('fsl4.1-') symlinks into /usr/bin that do
not conflict with existing files in any package and, moreover, allow tools
from multiple FSL versions to coexist on the same system. Any internal FSL
scripts are unaffected by this change. Adjust manpage and README.Debian to
document this change, as well as added a NEWS entry.
* Bumped Standard version to 3.9.1.0 -- no changes necessary.
* Removed menu integration of 'Nudge' tool to prevent overcrowding of menu
categories. It is of limited functionality and rarely used.
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