Package: python-h5py
Version: 1.3.0-2
Severity: important
After the update of python-numpy from 1.3.0 to 1.4.1 importing h5py fails.
The author of h5py recommended to recompile it:
On Tue, Jul 20, 2010 Andrew Collette (author of h5py) wrote:
> Unfortunately all you can do is recompile h5py yourself. The NumPy? group has
> changed the ABI enough in 1.4 that most precompiled Cython extensions are
> broken. You might also want to report this problem to the Debian maintainer.
import h5py
---------------------------------------------------------------------------
ValueError Traceback (most recent call last)
/home/liffi/<ipython console> in <module>()
/usr/lib/python2.6/dist-packages/h5py/__init__.py in <module>()
22
23 try:
---> 24 import h5
25 except ImportError, e:
26 # Many people try to load h5py after compiling, which fails in the
/home/liffi/h5.pyx in init h5py.h5 (h5py/h5.c:4823)()
/home/liffi/h5.pyx in h5py.h5.init_hdf5 (h5py/h5.c:3481)()
/home/liffi/h5r.pxd in init h5py._conv (h5py/_conv.c:3877)()
/home/liffi/h5s.pxd in init h5py.h5r (h5py/h5r.c:2187)()
/home/liffi/numpy.pxd in init h5py.h5s (h5py/h5s.c:4051)()
ValueError: numpy.dtype does not appear to be the correct type object
-- System Information:
Debian Release: squeeze/sid
APT prefers lenny
APT policy: (500, 'lenny'), (500, 'unstable')
Architecture: amd64 (x86_64)
Kernel: Linux 2.6.32-5-amd64 (SMP w/2 CPU cores)
Locale: LANG=en_US.UTF-8, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Versions of packages python-h5py depends on:
ii libc6 2.11.2-2 Embedded GNU C Library: Shared lib
ii libhdf5-serial-1.8.4 [lib 1.8.4-patch1-2 Hierarchical Data Format 5 (HDF5)
pn python <none> (no description available)
ii python-central 0.6.16 register and build utility for Pyt
python-h5py recommends no packages.
python-h5py suggests no packages.
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