On 15 December 2009 at 13:47, Kurt Hornik wrote:
| >>>>> Dirk Eddelbuettel writes:
|
| > Hi Nobuhiro,
|
| > On 15 December 2009 at 12:03, Nobuhiro Iwamatsu wrote:
| > | Hi, Dirk.
| > |
| > | 2009/12/15 Dirk Eddelbuettel <[email protected]>:
| > | >
| > | > On 15 December 2009 at 09:50, Nobuhiro Iwamatsu wrote:
| > | > | Package: r-base
| > | > | Version: 2.10.1-1
| > | > | Severity: important
| > | > | Tags: patch
| > | > | User: [email protected]
| > | > | Usertags: sh4
| > | > | X-Debbugs-CC: [email protected]
| > | >
| > | > Grrrr. That is a new upstream version that came out today after 10 days
with
| > | > prereleases. Too bad you didn;t test against the pre-releases...
| > |
| > | Oh, sorry.
| > | I got possible to build R just the other day.
|
| > No worries. We will at least have R 2.11.0 ready for next April :)
|
| > | > | Hi,
| > | > |
| > | > | I am now trying to run Debian on Renesas SH(sh4) CPU.
| > | > |
http://buildd.debian-ports.org/status/architecture.php?suite=unstable&a=sh4
| > | > |
| > | > | r-base FTBFS on SH4.
| > | > | Because configure included in r-base is created in old autoconf.
| > | > |
| > | > | -----
| > | > | checking how to get verbose linking output from gcc -std=gnu99... -v
| > | > | checking for C libraries of gcc -std=gnu99... -little
| > | > | -L/usr/lib/gcc/sh4-linux-gnu/4.3.4
| > | > | -L/usr/lib/gcc/sh4-linux-gnu/4.3.4/../../.. -lgcc_s
| > | > | checking for dummy main to link with Fortran 77 libraries... unknown
| > | > | configure: error: linking to Fortran libraries from C fails
| > | > | -----
| > | > |
| > | > | This become the error by the following contents in config.log.
| > | > | -----
| > | > | configure:27813: result: -little -L/usr/lib/gcc/sh4-linux-gnu/4.3.4
| > | > | -L/usr/lib/gcc/sh4-linux-gnu/4.3.4/../../.. -lgcc_s
| > | > | configure:27944: checking for dummy main to link with Fortran 77
libraries
| > | > | configure:27988: gcc -std=gnu99 -o conftest -g -O2 conftest.c -ldl
| > | > | -lm -little -lgfortran -lm >&5
| > | > | /usr/bin/ld.real: cannot find -little
| > | > | collect2: ld returned 1 exit status
| > | > | -----
| > | > |
| > | > | Could you update confiugre with new autoconf?
| > | > | Or please apply the patch which I attached.
| > | > | This is patch for quick fix.
| > | >
| > | > (Some members of) R upstream use Debian for development. Can you
indicate
| > | > which autoconf versions in Debian are good enough ?
| > |
| > | This problem is revised by the following patches.
| > | http://lists.gnu.org/archive/html/bug-autoconf/2008-10/msg00039.html
| > |
| > | Autoconf which this revision is taken in is autoconf-2.64.
| > | And autoconf of Debian is 2.65-3 now.
|
| > Ok, so quick question to Kurt: Do you know which autoconf version you
| > are running?
|
| Yes, of course. My Autoconf is the one from Debian testing, but this is
| not what gets used for creating confgure: svn diff gives
|
| --- configure (revision 50744)
| +++ configure (working copy)
| @@ -1,62 +1,85 @@
| #! /bin/sh
| # Guess values for system-dependent variables and create Makefiles.
| -# Generated by GNU Autoconf 2.61 for R 2.11.0.
| +# Generated by GNU Autoconf 2.65 for R 2.11.0.
|
| Are you saying one should use at least 2.64? This was released
| 2009-07-26, so I am not sure changing to
|
| AC_PREREQ(2.64)
|
| in configure.ac will make everyone in R-core happy ...
Dunno. Or else maybe I will have to re-run autoconf each time? But isn't
that worse?
Dirk
| -k
|
| > |
| > | >
| > | > Also, before you send me bug reports for every binary that I upload: Is
| > | > there a way to fix this a little better programmatically ?
| > | >
| > | Most of source pachages which use gfortran and configure was made in
| > | old autoconf became the object of this problem.
|
| > I will keep that in mind. Fortran parts often change less frequently
| > which increases the chances if autoconf files getting stale.
|
| > I will patch R 2.10.1 by hand as you suggested, but we should liaise
| > with Kurt to make sure everything is tied up correctly upstream.
|
| > Cheers, Dirk
|
| > | Best regards,
| > | Nobuhiro
| > | --
| > | Nobuhiro Iwamatsu
| > | iwamatsu at {nigauri.org / debian.org}
| > | GPG ID: 40AD1FA6
|
| > --
| > Three out of two people have difficulties with fractions.
|
--
Three out of two people have difficulties with fractions.
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