Bug#476103: ITP: ghmm -- Library with data structures and algorithms for Hidden Markov Models

[Sebastian Dröge]

Package: wnpp
Severity: wishlist
Owner: [EMAIL PROTECTED]

* Package name      : ghmm
  Upstream Authors  : Alexander Schliep
                      Benjamin Georgi
                      Wasinee Rungsarityotin
                      Ivan G. Costa
                      Janne Grunau
                      Matthias Heinig 
* URL               : http://www.ghmm.org
* License           : LGPL
  Description       : Library with data structures and algorithms for
Hidden Markov Models

Hi,
I plan to package ghmm. I will include the C library and python bindings
to it.

There will be one build of the C library against GSL (the GNU Scientific
Library which is GPL, thus causing possible license problems with some
software) and one build without GSL. These two builds will be ABI
compatible.

> The General Hidden Markov Model library (GHMM) is a freely available
> LGPL-ed C library implementing efficient data structures and
> algorithms for basic and extended HMMs. The development is hosted at
> Sourceforge http://sourceforge.net/projects/ghmm/, where you have
> access to the Subversion repository, mailing lists and forums.
> 
> The GHMM is developed by the Algorithmics group at the Max Planck
> Institute for Molecular Genetics.
> Features:
>       * Discrete and continous emissions
>       * Mixtures of PDFs for continous emissions
>       * Non-homogenous Markov chains
>       * Pair HMMs (contributed by Genoscope )
>       * Clustering and mixture modelling for HMMs
>       * Graphical Editor HMMEd
>       * Python bindings
>       * XML-based file format
>       * Portable (autoconf, automake, Windows)
>       * C++ API (NOT under active development, unsupported
Bye

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