Source: bedtools Version: 2.31.1+dfsg-2 Severity: minor Tags: patch Hi,
GNU Make now has a --shuffle option that simulates non-deterministic ordering of dependencies. See https://trofi.github.io/posts/238-new-make-shuffle-mode.html and also previous work in Debian by Santiago Vila: https://people.debian.org/~sanvila/make-shuffle/ This package fails to build with GNUMAKEFLAGS=--shuffle=random. I could also reproduce the failure with high number of parallelism (e.g. dpkg-buildpackage -j100). This patch fixes it. --- bedtools-2.31.1+dfsg.orig/Makefile +++ bedtools-2.31.1+dfsg/Makefile @@ -177,6 +177,8 @@ include $(HTSDIR)/htslib.mk # but ignores the directory's timestamp, which changes every time a .o file is written. $(BUILT_OBJECTS): | $(OBJ_DIR) +$(BUILT_OBJECTS): autoversion + $(BIN_DIR)/bedtools: autoversion $(BUILT_OBJECTS) $(HTSDIR)/libhts.a | $(BIN_DIR) @echo "- Building main bedtools binary." $(CCPREFIX) $(CC_WRAPPER) $(CXX) $(ALL_LDFLAGS) -o $(BIN_DIR)/bedtools $(BUILT_OBJECTS) $(HTSDIR)/libhts.a $(ALL_LIBS) Best, Lucas
