Package: wnpp Severity: wishlist X-Debbugs-Cc: debia...@lists.debian.org, cru...@debian.org
Subject: ITP: r-bioc-pwalign -- Perform pairwise sequence alignments Package: wnpp Owner: Michael R. Crusoe <cru...@debian.org> Severity: wishlist * Package name : r-bioc-pwalign Version : 1.0.0 Upstream Author : Patrick Aboyoun, * URL : https://bioconductor.org/packages/pwalign * License : Artistic-2.0 Programming Lang: GNU R Description : Perform pairwise sequence alignments The two main functions in the package are pairwiseAlignment() and stringDist(). The former solves (Needleman-Wunsch) global alignment, (Smith-Waterman) local alignment, and (ends-free) overlap alignment problems. The latter computes the Levenshtein edit distance or pairwise alignment score matrix for a set of strings. Remark: This package is maintained by Debian R Packages Maintainers at https://salsa.debian.org/r-pkg-team/r-bioc-pwalign This package is a build-dep for r-bioc-shortread & Bioconductor 3.19
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