Package: bedtools
Version: 2.29.2+dfsg-4
Severity: serious
The autopkgtests for bedtools are failing on all tested architectures
(though they are "not a regression" on i386 and armhf). When I look at
the amd64 failure logs, the failures all seem to be missing "../htsutil"
Testing bedtools bamtobed:
test-bamtobed.sh: line 22: ../htsutil: No such file or directory
Testing bedtools bamtofastq:
test-bamtofastq.sh: line 17: ../htsutil: No such file or directory
Testing bedtools bedtobam:
bedtobam.t1...test-bedtobam.sh: line 23: ../htsutil: No such file or
directory
Testing bedtools coverage:
test-coverage.sh: line 22: ../htsutil: No such file or directory
Testing bedtools genomecov:
test-genomecov.sh: line 22: ../htsutil: No such file or directory
Testing bedtools intersect:
intersect.t01...ok
intersect.t02...ok
intersect.t03...ok
intersect.t04...ok
intersect.t05...ok
intersect.t06...ok
intersect.t07...ok
intersect.t08...ok
intersect.t09...ok
intersect.t10...ok
intersect.t11...ok
intersect.t12...ok
intersect.t13...ok
intersect.t14...ok
intersect.t15...ok
intersect.t16...ok
test-intersect.sh: line 200: ../htsutil: No such file or directory
Testing bedtools multicov:
test-multicov.sh: line 17: ../htsutil: No such file or directory
