Source: python-skbio Version: 0.5.6-3 Tags: ftbfs sid bullseye User: debian-pyt...@lists.debian.org Usertags: python3.9
Hi Maintainer Python-skbio FTBFS with Python 3.9 as a supported Python version. I've copied what I hope is the relevant part of the log below. Regards Graham [1] https://buildd.debian.org/status/package.php?p=python-skbio =================================== FAILURES =================================== _ TestTabularMSAPositionalMetadata.test_positional_metadata_getter_set_column_array _ ValueError: Length of values (7) does not match length of index (8) During handling of the above exception, another exception occurred: self = <skbio.alignment.tests.test_tabular_msa.TestTabularMSAPositionalMetadata testMethod=test_positional_metadata_getter_set_column_array> def test_positional_metadata_getter_set_column_array(self): length = 8 obj = self._positional_metadata_constructor_( length, positional_metadata={'foo': range(length)}) # array-like objects will fail if wrong size. for array_like in (np.array(range(length-1)), range(length-1), np.array(range(length+1)), range(length+1)): with self.assertRaisesRegex(ValueError, "Length of values does not match " "length of index"): > obj.positional_metadata['bar'] = array_like E AssertionError: "Length of values does not match length of index" does not match "Length of values (7) does not match length of index (8)" skbio/metadata/_testing.py:721: AssertionError _ TestPositionalMetadataMixin.test_positional_metadata_getter_set_column_array _ ValueError: Length of values (7) does not match length of index (8) During handling of the above exception, another exception occurred: self = <skbio.metadata.tests.test_mixin.TestPositionalMetadataMixin testMethod=test_positional_metadata_getter_set_column_array> def test_positional_metadata_getter_set_column_array(self): length = 8 obj = self._positional_metadata_constructor_( length, positional_metadata={'foo': range(length)}) # array-like objects will fail if wrong size. for array_like in (np.array(range(length-1)), range(length-1), np.array(range(length+1)), range(length+1)): with self.assertRaisesRegex(ValueError, "Length of values does not match " "length of index"): > obj.positional_metadata['bar'] = array_like E AssertionError: "Length of values does not match length of index" does not match "Length of values (7) does not match length of index (8)" skbio/metadata/_testing.py:721: AssertionError _ TestSequencePositionalMetadata.test_positional_metadata_getter_set_column_array _ ValueError: Length of values (7) does not match length of index (8) During handling of the above exception, another exception occurred: self = <skbio.sequence.tests.test_sequence.TestSequencePositionalMetadata testMethod=test_positional_metadata_getter_set_column_array> def test_positional_metadata_getter_set_column_array(self): length = 8 obj = self._positional_metadata_constructor_( length, positional_metadata={'foo': range(length)}) # array-like objects will fail if wrong size. for array_like in (np.array(range(length-1)), range(length-1), np.array(range(length+1)), range(length+1)): with self.assertRaisesRegex(ValueError, "Length of values does not match " "length of index"): > obj.positional_metadata['bar'] = array_like E AssertionError: "Length of values does not match length of index" does not match "Length of values (7) does not match length of index (8)" skbio/metadata/_testing.py:721: AssertionError
