Package: wnpp Severity: wishlist Owner: Debian-med project <debian-...@lists.debian.org> X-Debbugs-Cc: debian-de...@lists.debian.org, debian-...@lists.debian.org
* Package name : sepp Version : 4.3.10 Upstream Author : Siavash Mirarab <smira...@gmail.com> * URL : https://github.com/smirarab/sepp/ * License : GPL-3 Programming Lang: Python, Java Description : methods using ensembles of Hidden Markov Models (HMM) The tools SEPP and TIPP implementing these methods use ensembles of Hidden Markov Models (HMMs) in different ways, each focusing on a different problem. SEPP stands for "SATe-enabled Phylogenetic Placement", and addresses the problem of phylogenetic placement of short reads into reference alignments and trees. TIPP stands for "Taxonomic Identification and Phylogenetic Profiling", and addresses the problem of taxonomic identification and abundance profiling of metagenomic data. This package is useful to treat genomic data and will be maintained by Debian-med.
