Cool! Please push and I'll have a look if needed. vt is building for uploading. Kind regards, Andreas.
On Thu, Jun 18, 2020 at 01:34:11PM +0200, Antoni Villalonga wrote: > Package: wnpp > Severity: wishlist > > Subject: ITP: pairtools -- Framework to process sequencing data from a Hi-C > experiment > Package: wnpp > Owner: Antoni Villalonga <[email protected]> > Severity: wishlist > > * Package name : pairtools > Version : 0.3.0 > Upstream Author : Mirny Lab > * URL : https://github.com/mirnylab/pairtools > * License : MIT > Programming Lang: Python > Description : Framework to process sequencing data from a Hi-C > experiment > Simple and fast command-line framework to process sequencing data from a Hi-C > experiment. > . > Process pair-end sequence alignments and perform the following operations: > . > - Detect ligation junctions (a.k.a. Hi-C pairs) in aligned paired-end > sequences of Hi-C DNA molecules > - Sort .pairs files for downstream analyses > - Detect, tag and remove PCR/optical duplicates > - Generate extensive statistics of Hi-C datasets > - Select Hi-C pairs given flexibly defined criteria > - Restore .sam alignments from Hi-C pairs > > Remark: This package is maintained by Debian Med Packaging Team at > https://salsa.debian.org/med-team/pairtools > > _______________________________________________ > Debian-med-packaging mailing list > [email protected] > https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-med-packaging -- http://fam-tille.de
