Package: wnpp Severity: wishlist Subject: ITP: r-bioc-dexseq -- Inference of differential exon usage in RNA-Seq Package: wnpp Owner: Michael R. Crusoe <michael.cru...@gmail.com> Severity: wishlist
* Package name : r-bioc-dexseq Version : 1.32.0 Upstream Author : Simon Anders <sand...@fs.tum.de> and Alejandro Reyes * URL : https://bioconductor.org/packages/DEXSeq/ * License : GPL-3+ Programming Lang: GNU R Description : Inference of differential exon usage in RNA-Seq The package is focused on finding differential exon usage using RNA-seq exon counts between samples with different experimental designs. It provides functions that allows the user to make the necessary statistical tests based on a model that uses the negative binomial distribution to estimate the variance between biological replicates and generalized linear models for testing. The package also provides functions for the visualization and exploration of the results. Remark: This package is maintained by Debian R Packages Maintainers at https://salsa.debian.org/r-pkg-team/r-bioc-dexseq This package is a precondition for trinityrnaseq 2.10.0
