Source: infernal
Version: 1.1.3-4
Severity: wishlist
Tags: patch
User: reproducible-bui...@lists.alioth.debian.org
Usertags: timestamps
X-Debbugs-Cc: reproducible-b...@lists.alioth.debian.org
Hi,
Whilst working on the Reproducible Builds effort [0] we noticed that
infernal could not be built reproducibly:
│ │ │ ├── ./usr/share/doc/infernal/examples/testsuite/i49.tbl
│ │ │ │ @@ -5,10 +5,10 @@
│ │ │ │ #
│ │ │ │ # Program: cmsearch
│ │ │ │ # Version: 1.1.3 (Nov 2019)
│ │ │ │ # Pipeline mode: SEARCH
│ │ │ │ # Query file: ./../testsuite/bug-i49.cm
│ │ │ │ # Target file: ./../testsuite/bug-i49.fa
│ │ │ │ # Option settings: ../src/cmsearch --tblout i49.tbl --toponly --cpu 0
./../testsuite/bug-i49.cm ./../testsuite/bug-i49.fa
│ │ │ │ -# Current dir: /build/1st/infernal-1.1.3/testsuite
│ │ │ │ -# Date: Sun Mar 1 19:36:34 2020
│ │ │ │ +# Current dir: /build/2/infernal-1.1.3/2nd/testsuite
│ │ │ │ +# Date: Mon Apr 5 04:14:10 2021
│ │ │ │ # [ok]
Patch attached that excludes this nondetermistic file from the binary
package.
[0] https://reproducible-builds.org/
Regards,
--
,''`.
: :' : Chris Lamb
`. `'` la...@debian.org / chris-lamb.co.uk
`-
--- a/debian/rules 2020-03-04 10:10:02.000119663 -0800
--- b/debian/rules 2020-03-04 10:20:14.910600860 -0800
@@ -51,4 +51,5 @@
cd $(sampledir) && ln -s
../../../../lib/$(DEB_TARGET_MULTIARCH)/$(DEB_SOURCE)/examples/easel ./easel \
&& ln -s
../../../../lib/$(DEB_TARGET_MULTIARCH)/$(DEB_SOURCE)/examples/src ./src
cp -aR testsuite $(sampledir)/
+ rm $(sampledir)/testsuite/*.tbl
cp ./easel/devkit/sqc $(sampledir)/
