Source: libbio-graphics-perl
Version: 2.40-3
Severity: serious
Tags: ftbfs sid bullseye
Justification: fails to build from source
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The package fails its testsuite both during build:
dh_auto_test
perl Build test --verbose 1
# Failed test 'use Bio::Graphics::FeatureFile;'
# at t/BioGraphics.t line 26.
# Tried to use 'Bio::Graphics::FeatureFile'.
# Error: Can't locate Bio/DB/SeqFeature/Store.pm in @INC (you may need to
install the Bio::DB::SeqFeature::Store module) (@INC contains: .
/build/libbio-graphics-perl-2.40/t/../lib
/build/libbio-graphics-perl-2.40/blib/lib
/build/libbio-graphics-perl-2.40/blib/arch /etc/perl
/usr/local/lib/x86_64-linux-gnu/perl/5.30.0 /usr/local/share/perl/5.30.0
/usr/lib/x86_64-linux-gnu/perl5/5.30 /usr/share/perl5
/usr/lib/x86_64-linux-gnu/perl/5.30 /usr/share/perl/5.30
/usr/local/lib/site_perl /usr/lib/x86_64-linux-gnu/perl-base) at
/build/libbio-graphics-perl-2.40/t/../lib/Bio/Graphics/FeatureFile.pm line 259.
# BEGIN failed--compilation aborted at
/build/libbio-graphics-perl-2.40/t/../lib/Bio/Graphics/FeatureFile.pm line 259.
# Compilation failed in require at t/BioGraphics.t line 26.
# BEGIN failed--compilation aborted at t/BioGraphics.t line 26.
Can't locate object method "new" via package "Bio::Graphics::FeatureFile" at
t/BioGraphics.t line 49, <DATA> line 192.
# Looks like your test exited with 255 just after 3.
t/BioGraphics.t ..
1..49
ok 1 - use GD::Image;
not ok 2 - use Bio::Graphics::FeatureFile;
ok 3 - use Bio::Graphics::Panel;
Dubious, test returned 255 (wstat 65280, 0xff00)
Failed 47/49 subtests
Can't locate Bio/DB/SeqFeature/Store.pm in @INC (you may need to install the
Bio::DB::SeqFeature::Store module) (@INC contains:
/build/libbio-graphics-perl-2.40/t/../lib
/build/libbio-graphics-perl-2.40/t/../blib/lib
/build/libbio-graphics-perl-2.40/t/../blib/arch
/build/libbio-graphics-perl-2.40/blib/lib
/build/libbio-graphics-perl-2.40/blib/arch /etc/perl
/usr/local/lib/x86_64-linux-gnu/perl/5.30.0 /usr/local/share/perl/5.30.0
/usr/lib/x86_64-linux-gnu/perl5/5.30 /usr/share/perl5
/usr/lib/x86_64-linux-gnu/perl/5.30 /usr/share/perl/5.30
/usr/local/lib/site_perl /usr/lib/x86_64-linux-gnu/perl-base .) at
/build/libbio-graphics-perl-2.40/t/../lib/Bio/Graphics/FeatureFile.pm line 259.
BEGIN failed--compilation aborted at
/build/libbio-graphics-perl-2.40/t/../lib/Bio/Graphics/FeatureFile.pm line 259.
Compilation failed in require at
/build/libbio-graphics-perl-2.40/t/../lib/Bio/Graphics/Wiggle/Loader.pm line
118.
BEGIN failed--compilation aborted at
/build/libbio-graphics-perl-2.40/t/../lib/Bio/Graphics/Wiggle/Loader.pm line
118.
Compilation failed in require at t/Wiggle.t line 16.
BEGIN failed--compilation aborted at t/Wiggle.t line 16.
# Looks like your test exited with 2 before it could output anything.
t/Wiggle.t .......
1..11
Dubious, test returned 2 (wstat 512, 0x200)
Failed 11/11 subtests
Test Summary Report
- -------------------
t/BioGraphics.t (Wstat: 65280 Tests: 3 Failed: 1)
Failed test: 2
Non-zero exit status: 255
Parse errors: Bad plan. You planned 49 tests but ran 3.
t/Wiggle.t (Wstat: 512 Tests: 0 Failed: 0)
Non-zero exit status: 2
Parse errors: Bad plan. You planned 11 tests but ran 0.
Files=2, Tests=3, 1 wallclock secs ( 0.02 usr 0.01 sys + 0.38 cusr 0.05
csys = 0.46 CPU)
Result: FAIL
Failed 2/2 test programs. 1/3 subtests failed.
dh_auto_test: perl Build test --verbose 1 returned exit code 2
and also during autopkgtest, e.g.
https://ci.debian.net/data/autopkgtest/testing/amd64/libb/libbio-graphics-perl/3123490/log.gz
Cheers,
gregor
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