Hi, I tried to have a look at the issue caused by t-coffee 12 which became visible in the smoke test of libbio-tools-run-alignment-tcoffee-perl. Liubov had checked it before and filed an issue upstream[1] but at my side the test to reproduce the bug does not fail. I wonder if someone from the Perl team would be able to iron out the actual t-coffee call that causes the coredump. If we would have some
t-coffee options / args --> COREDUMP we could start to run this through gdb. If I do not get any help of this kind I have no idea to hunt this down. Kind regards, Andreas. [1] https://github.com/cbcrg/tcoffee/issues/13 -- http://fam-tille.de