Playing with Sawfish configuration i've found a workaround for this bug. You can modify the "Focus mode" of the Nautilus desktop window to "click" using the "Matched Windows" pane of the "Sawfish Configurator" creating a rule based on the window's name (in this case "^Desktop$") or class ("^Nautilus/desktop_window$"). In this way you can give focus to the desktop window and so rename a file name.
In the Sawfish user customization file you should have something like that: (quote (((WM_NAME . "^Desktop$")) (focus-mode . click))) (quote match-window) (quote sawfish.wm.ext.match-window)) Andrea