Hi all, thanks John for the detailed explanation and the patches.
>> So the real solution here is to revert your autoconf-archive to 6dc6cc5^ >> and use that unborked ax_with_curses.m4, which will in future be bundled >> with samtools. > > This should have been 0351b06^. I see. For now I have bundled the correct ax_with_curses.m4 with our source package (alongside ax_with_htslib.m4) and use it instead of the one in autoconf-archive until this issue gets addressed by you upstream. >>> Cannot open a pty at test/test.pl line 551. > > I've now further tweaked test/test.pl's pty setup to skip the tests instead > of aborting with this message. So you may wish to pull this in as a patch > as well as fixing /dev inside your chroot :-) > > https://github.com/samtools/samtools/commit/ce4a601a0859bc9ccfcf000dddf0ac77e7d576b3 Thanks. This has fixed the problem for me. Is this solution OK for everyone? Cheers Sascha
