Package: wnpp Severity: wishlist Owner: Andreas Tille <ti...@debian.org>
* Package name : r-bioc-multtest Version : 2.24.0 Upstream Author : Katherine S. Pollard * URL : http://bioconductor.org/packages/release/bioc/html/multtest.html * License : LGPL Programming Lang: R Description : Bioconductor resampling-based multiple hypothesis testing Non-parametric bootstrap and permutation resampling-based multiple testing procedures (including empirical Bayes methods) for controlling the family-wise error rate (FWER), generalized family-wise error rate (gFWER), tail probability of the proportion of false positives (TPPFP), and false discovery rate (FDR). Several choices of bootstrap-based null distribution are implemented (centered, centered and scaled, quantile-transformed). Single-step and step-wise methods are available. Tests based on a variety of t- and F-statistics (including t-statistics based on regression parameters from linear and survival models as well as those based on correlation parameters) are included. When probing hypotheses with t-statistics, users may also select a potentially faster null distribution which is multivariate normal with mean zero and variance covariance matrix derived from the vector influence function. Results are reported in terms of adjusted p-values, confidence regions and test statistic cutoffs. The procedures are directly applicable to identifying differentially expressed genes in DNA microarray experiments. Remark: This is another precondition for r-other-apmswapp and will be maintained by the Debian Med team at svn://anonscm.debian.org/debian-med/trunk/packages/R/r-bioc-multtest/trunk/ -- To UNSUBSCRIBE, email to debian-bugs-dist-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org
