Package: wnpp Severity: wishlist Owner: Andreas Tille <[email protected]>
* Package name : swarm-cluster Version : 1.2.19 Upstream Author : Torbjørn Rognes <[email protected]> * URL : https://github.com/torognes/swarm * License : Affero-GPL-3 Programming Lang: C Description : robust and fast clustering method for amplicon-based studies The purpose of swarm is to provide a novel clustering algorithm to handle large sets of amplicons. Traditional clustering algorithms results are strongly input-order dependent, and rely on an arbitrary global clustering threshold. swarm results are resilient to input-order changes and rely on a small local linking threshold d, the maximum number of differences between two amplicons. swarm forms stable high-resolution clusters, with a high yield of biological information. Remark: This package was prepared by Tim Booth from Bio-Linux and adopted by the Debian Med team. The packaging is available at svn://anonscm.debian.org/debian-med/trunk/packages/swarm-cluster/trunk/ -- To UNSUBSCRIBE, email to [email protected] with a subject of "unsubscribe". Trouble? Contact [email protected]
