Hi Aaron,
thanks for your bug report. Since I have no direct access to a ia64
machine (except the ones any DD can login but this would be more time
consuming) I wonder whether you could possibly provide a patch to the
makefile which seems to be easy enough when sitting on such a machine.
It is just not clear to me whether only one of CXXFLAGS and
FORTRAN_FLAGS needs to be droped or both. Once this is clear some if
statement evaluating `dpkg-architecture -qDEB_BUILD_ARCH` to be equal to
ia64 should do the trick.
Any patch / team upload is more than welcome
Andreas.
On Tue, Sep 03, 2013 at 06:53:07PM -0400, Aaron M. Ucko wrote:
> Source: mothur
> Version: 1.31.2+dfsg-1
> Severity: serious
> Justification: fails to build from source
>
> The ia64 build of mothur failed because GCC doesn't recognize -m64 there:
>
> if [ 64 -eq 64 ] ; then \
> dh_auto_build -- 64BIT_VERSION=yes USEMPI=yes && \
> mv mothur mothur-mpi && make clean && \
> dh_auto_build -- 64BIT_VERSION=yes USEMPI=no ; \
> else \
> dh_auto_build -- 64BIT_VERSION=no ; \
> fi
> make[2]: Entering directory `/«BUILDDIR»/mothur-1.31.2+dfsg'
> gfortran -c -m64 *.f
> f951: error: unrecognized command line option '-m64'
>
> I'd suggest doing away with that flag altogether, since it's redundant
> on the architectures that do support it (disregarding multiarch
> compiler installations, on which mothur of course doesn't build-depend).
>
> Could you please look into it?
>
> Thanks!
>
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