Is the reported inconsistency the fact that a removed line is shown as
hunk header? Which output do you expect instead?
Please note that GNU diff -up does the same; without -p it doesn't show
hunk headers at all.
You can select a different method to look for hunk headers by assigning
the attribute "diff" to files. The gitattributes(5) manpage mentions
diff=tex as an example (under the heading "Defining a custom
hunk-header"). This will still look for it in the pre-image (old file),
though.
René
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