Your message dated Fri, 13 Mar 2026 00:43:36 +0000
with message-id <[email protected]>
and subject line Bug#1127810: fixed in ovito 3.15.0~ds-1
has caused the Debian Bug report #1127810,
regarding ovito: FTBFS gemmi/remarks.hpp: No such file or directory
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
1127810: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1127810
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: ovito
Version: 3.13.1~ds-1
Severity: normal
Tags: ftbfs upstream
Control: forwarded -1 https://gitlab.com/stuko/ovito/-/issues/236
ovito (testing 3.14.1) fails to build:
[ 61%] Building CXX object
src/ovito/gui/desktop/CMakeFiles/Gui.dir/properties/ModifierDelegateParameterUI.cpp.o
cd /projects/debichem/build/ovito/obj-x86_64-linux-gnu/src/ovito/gui/desktop &&
/usr/bin/c++ -DGui_EXPORTS -DOVITO_CORE_EXPORT=Q_DECL_IMPORT
-DOVITO_GUIBASE_EXPORT=Q_DECL_IMPORT -DOVITO_GUI_EXPORT=Q_DECL_EXPORT
-DOVITO_PLUGIN_NAME=\"Gui\"
-DOVITO_SCRIPT_EXTENSIONS_RELATIVE_PATH=\"../share/ovito/scripts\"
-DOVITO_VIDEO_OUTPUT_SUPPORT -DOVITO_VIEWPORTWIDGET_EXPORT=Q_DECL_IMPORT
-DOVITO_ZLIB_SUPPORT -DOVITO_ZSTD_SUPPORT -DQT_CORE_LIB -DQT_DBUS_LIB
-DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_NO_FOREACH=1
-DQT_NO_KEYWORDS=1 -DQT_WIDGETS_LIB
-I/projects/debichem/build/ovito/obj-x86_64-linux-gnu/src/ovito/gui/desktop/Gui_autogen/include
-I/projects/debichem/build/ovito/src
-I/projects/debichem/build/ovito/src/3rdparty/zstd/zlibWrapper -isystem
/usr/include/x86_64-linux-gnu/qt6/QtCore -isystem
/usr/include/x86_64-linux-gnu/qt6 -isystem
/usr/lib/x86_64-linux-gnu/qt6/mkspecs/linux-g++ -isystem
/usr/include/x86_64-linux-gnu/qt6/QtGui -isystem
/projects/debichem/build/ovito/src/3rdparty/function2/include -isystem
/usr/include/x86_64-linux-gnu/qt6/QtNetwork -isystem
/usr/include/x86_64-linux-gnu/qt6/QtWidgets -isystem
/usr/include/x86_64-linux-gnu/qt6/QtDBus -g -O2
-ffile-prefix-map=/projects/debichem/build/ovito=. -fstack-protector-strong
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection
-Wdate-time -D_FORTIFY_SOURCE=2 -std=gnu++23 -fPIC -fvisibility=hidden
-fvisibility-inlines-hidden -Wno-multichar -Winvalid-pch -include
/projects/debichem/build/ovito/obj-x86_64-linux-gnu/src/ovito/gui/desktop/CMakeFiles/Gui.dir/cmake_pch.hxx
-MD -MT
src/ovito/gui/desktop/CMakeFiles/Gui.dir/properties/ModifierDelegateParameterUI.cpp.o
-MF CMakeFiles/Gui.dir/properties/ModifierDelegateParameterUI.cpp.o.d -o
CMakeFiles/Gui.dir/properties/ModifierDelegateParameterUI.cpp.o -c
/projects/debichem/build/ovito/src/ovito/gui/desktop/properties/ModifierDelegateParameterUI.cpp
/projects/debichem/build/ovito/src/ovito/particles/import/pdb/PDBImporter.cpp:32:10:
fatal error: gemmi/remarks.hpp: No such file or directory
32 | #include <gemmi/remarks.hpp>
| ^~~~~~~~~~~~~~~~~~~
compilation terminated.
make[3]: *** [src/ovito/particles/CMakeFiles/Particles.dir/build.make:873:
src/ovito/particles/CMakeFiles/Particles.dir/import/pdb/PDBImporter.cpp.o]
Error 1
The error occurs since gemmi 0.7 moved remarks.hpp into pdb.cpp
and also occurs since upstream uses a 3rd party vendored copy of gemmi
which is removed in the debian source.
Reported upstream
https://gitlab.com/stuko/ovito/-/issues/236
upstream says gemmi 0.7 should be supported in ovito 3.15,
currently in development
--- End Message ---
--- Begin Message ---
Source: ovito
Source-Version: 3.15.0~ds-1
Done: Drew Parsons <[email protected]>
We believe that the bug you reported is fixed in the latest version of
ovito, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Drew Parsons <[email protected]> (supplier of updated ovito package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Thu, 12 Mar 2026 23:51:06 +0100
Source: ovito
Architecture: source
Version: 3.15.0~ds-1
Distribution: experimental
Urgency: medium
Maintainer: Debian Pan Maintainers
<[email protected]>
Changed-By: Drew Parsons <[email protected]>
Closes: 1127810
Changes:
ovito (3.15.0~ds-1) experimental; urgency=medium
.
* Team upload.
* New upstream release
- supports gemmi 0.7. Closes: #1127810
- deprecates debian patch 0007_drop-pyclass-references-in-doc.patch
* Build-Depends: libgemmi-dev rather than gemmi-dev
(for gemmi >= 0.7.3, providing virtual AnyStream::tell)
* update debian patches to use installed package cmake config files
- 0002_use-debian-gemmi.patch to use gemmi (gemmi-dev)
- 3rdparty_zstd_zlibWrapper_source.patch to use zstd (libzstd-dev)
* update 0002_use-debian-gemmi.patch to make copy_line in
GemmiCompressedTextReader (PDBImporter.cpp) shadow, not override
the definition in AnyStream, since it is not virtual in gemmi
(upstream had patched their vendored copy)
* update debian/watch to v5 GitLab template
* Standards-Version: 4.7.3
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