Dear all,
The problem is resolved. Here is what I have done:
Upgraded the xcode, cmake and macOS then restarted the computer.
./candi.sh -j 8 --packages="hdf5 p4est trilinos dealii"
However, ended with exit 2, which was different from the previous (exit 1).
Remove hdf5 and run as below:
./candi.sh -j 8 --packages="p4est trilinos dealii"
Thank you for your support.
-Jaman
On Thu, Jan 2, 2025 at 5:44 PM akash ahmed <ahmed0...@gmail.com> wrote:
> Dear Dr. Maier:
>
> Good evening. Yes, I could compile the hello_world.cpp program with g++
> and it works. Then
>
> I uninstalled the "CommandLineTools" package and removed with sudo rm -rf
> /Library/Developer/CommandLineTools
>
> Again, I installed homebrew which installed the Xcode.
> Then installed with
>
> ./candi.sh -j 8 --packages="hdf5 p4est trilinos dealii"
>
>
> and unfortunately, encountered the same issue.
>
>
> Thank you
>
> Jaman
>
>
> On Thu, Jan 2, 2025 at 3:44 PM Matthias Maier <tam...@43-1.org> wrote:
>
>> It picks up the correct compiler:
>>
>> /Library/Developer/CommandLineTools/usr/bin/c++
>>
>> But then all of the copmiler invocations fail with something like:
>>
>> ld: library not found for -lc++
>>
>> This looks like that the C++ standard library (which is called libc++
>> for clang/llvm) is not installed properly.
>>
>>
>>
>> Are you able to compile a simple hello world by hand? hello_world.cpp:
>>
>> #include <iostream>
>> int main() { std::cout << "Hello World!" << std::endl; }
>>
>> (If yes, did you use the compiler at
>> /Library/Developer/CommandLineTools/usr/bin/c++ ?)
>>
>>
>>
>> Can you uninstall the "CommandLineTools" package, make sure that the
>> directory is completely removed, and reinstall? (This fixed a similar
>> issue lately for us.)
>>
>>
>>
>> Best,
>> Matthias
>>
>>
>>
>> On Wed, Jan 1, 2025, at 14:25 CST, akash ahmed <ahmed0...@gmail.com>
>> wrote:
>>
>> > Dear Dr. Maier:
>> >
>> > Sure, please find it attached to this email.
>> >
>> > Thank you
>> > Jaman
>> >
>> > On Wed, Jan 1, 2025 at 2:15 PM Matthias Maier <tam...@43-1.org> wrote:
>> >
>> >> Would you mind to post the file
>> >>
>> >> <build directory>/CMakeFiles/CMakeConfigureLog.yaml ?
>> >>
>> >> Happy New Year,
>> >> Matthias
>> >>
>> >>
>> >>
>> >> On Wed, Jan 1, 2025, at 08:48 CST, akash ahmed <ahmed0...@gmail.com>
>> >> wrote:
>> >>
>> >> > Dear Dr. Maier:
>> >> >
>> >> > Happy New Year. Thank you so much for your response. I appreciate it.
>> >> > I have followed the instructions given in the link and tried to
>> install
>> >> > the dealii. However, the problem still exists. Here is the updated
>> >> status:
>> >> >
>> >> > (base) mmohebuj@CASTFX0F4V2Math ~ % brew doctor
>> >> >
>> >> > Your system is ready to brew.
>> >> >
>> >> > (base) mmohebuj@CASTFX0F4V2Math ~ % xcode-select -p
>> >> >
>> >> > /Applications/Xcode.app/Contents/Developer
>> >> >
>> >> > (base) mmohebuj@CASTFX0F4V2Math ~ % ls -l
>> >> > /Library/Developer/CommandLineTools
>> >> >
>> >> > total 0
>> >> >
>> >> > drwxr-xr-x 5 root wheel 160 Dec 7 01:09 Library
>> >> >
>> >> > drwxr-xr-x 7 root wheel 224 Dec 31 17:07 SDKs
>> >> >
>> >> > drwxr-xr-x 7 root wheel 224 Dec 7 01:12 usr
>> >> >
>> >> > (base) mmohebuj@CASTFX0F4V2Math ~ % ls -l
>> >> > /Library/Developer/CommandLineTools
>> >> >
>> >> > total 0
>> >> >
>> >> > drwxr-xr-x 5 root wheel 160 Dec 7 01:09 Library
>> >> >
>> >> > drwxr-xr-x 7 root wheel 224 Dec 31 17:07 SDKs
>> >> >
>> >> > drwxr-xr-x 7 root wheel 224 Dec 7 01:12 usr
>> >> >
>> >> > (base) mmohebuj@CASTFX0F4V2Math ~ % xcode-select --install
>> >> >
>> >> > xcode-select: note: Command line tools are already installed. Use
>> >> "Software
>> >> > Update" in System Settings or the softwareupdate command line
>> interface
>> >> to
>> >> > install updates
>> >> >
>> >> > (base) mmohebuj@CASTFX0F4V2Math ~ % xcode-select -p
>> >> >
>> >> > /Applications/Xcode.app/Contents/Developer
>> >> >
>> >> > (base) mmohebuj@CASTFX0F4V2Math ~ % git --version
>> >> >
>> >> > git version 2.39.5 (Apple Git-154)
>> >> >
>> >> > (base) mmohebuj@CASTFX0F4V2Math ~ % brew config
>> >> >
>> >> > HOMEBREW_VERSION: 4.4.14
>> >> >
>> >> > ORIGIN: https://github.com/Homebrew/brew
>> >> >
>> >> > HEAD: f84082963da8af8c9ccd6dffbe932eba457e2b78
>> >> >
>> >> > Last commit: 2 days ago
>> >> >
>> >> > Branch: stable
>> >> >
>> >> > Core tap JSON: 01 Jan 00:49 UTC
>> >> >
>> >> > Core cask tap JSON: 01 Jan 00:49 UTC
>> >> >
>> >> > HOMEBREW_PREFIX: /opt/homebrew
>> >> >
>> >> > HOMEBREW_CASK_OPTS: []
>> >> >
>> >> > HOMEBREW_MAKE_JOBS: 12
>> >> >
>> >> > Homebrew Ruby: 3.3.6 =>
>> >> > /opt/homebrew/Library/Homebrew/vendor/portable-ruby/3.3.6/bin/ruby
>> >> >
>> >> > CPU: dodeca-core 64-bit arm_blizzard_avalanche
>> >> >
>> >> > Clang: 16.0.0 build 1600
>> >> >
>> >> > Git: 2.39.5 => /Applications/Xcode.app/Contents/Developer/usr/bin/git
>> >> >
>> >> > Curl: 8.7.1 => /usr/bin/curl
>> >> >
>> >> > macOS: 14.7.2-arm64
>> >> >
>> >> > CLT: 16.2.0.0.1.1733547573
>> >> >
>> >> > Xcode: 16.2
>> >> >
>> >> > Rosetta 2: false
>> >> >
>> >> > (base) mmohebuj@CASTFX0F4V2Math ~ % cmake --version
>> >> >
>> >> > cmake version 3.31.3
>> >> >
>> >> >
>> >> > CMake suite maintained and supported by Kitware (kitware.com/cmake).
>> >> >
>> >> >
>> >> > *./candi.sh -j 8 --packages="hdf5 p4est trilinos dealii"*
>> >> >
>> >> > -- Include
>> >>
>> /Users/mmohebuj/dealii-candi/tmp/unpack/deal.II-v9.6.1/cmake/setup_compiler_flags.cmake
>> >> >
>> >> > -- Performing Test DEAL_II_HAVE_USABLE_USER_FLAGS_DEBUG
>> >> >
>> >> > -- Performing Test DEAL_II_HAVE_USABLE_USER_FLAGS_DEBUG - Success
>> >> >
>> >> > -- Performing Test DEAL_II_HAVE_USABLE_USER_FLAGS_RELEASE
>> >> >
>> >> > -- Performing Test DEAL_II_HAVE_USABLE_USER_FLAGS_RELEASE - Success
>> >> >
>> >> > --
>> >> >
>> >> > -- Include
>> >>
>> /Users/mmohebuj/dealii-candi/tmp/unpack/deal.II-v9.6.1/cmake/setup_compiler_flags_gnu.cmake
>> >> >
>> >> > --
>> >> >
>> >> > -- Include
>> >>
>> /Users/mmohebuj/dealii-candi/tmp/unpack/deal.II-v9.6.1/bundled/setup_bundled.cmake
>> >> >
>> >> > --
>> >> >
>> >> > -- Include
>> >>
>> /Users/mmohebuj/dealii-candi/tmp/unpack/deal.II-v9.6.1/cmake/checks/check_01_cpu_features.cmake
>> >> >
>> >> > --
>> >> >
>> >> > -- Include
>> >>
>> /Users/mmohebuj/dealii-candi/tmp/unpack/deal.II-v9.6.1/cmake/checks/check_01_cxx_features.cmake
>> >> >
>> >> > -- C++17 support is disabled.
>> >> >
>> >> > CMake Error at cmake/checks/check_01_cxx_features.cmake:368
>> (message):
>> >> >
>> >> >
>> >> >
>> >> > The current version of deal.II requires a compiler with enabled
>> C++17
>> >> >
>> >> > support. Make sure to use a modern enough compiler (GCC version 9
>> >> onwards,
>> >> >
>> >> > Clang version 10 onwards, or Microsoft MS VS 2019 onwards) and
>> check
>> >> that
>> >> >
>> >> > the compiler flag "-std=" is either unset, or set to at least
>> c++17.
>> >> >
>> >> > Similarly, please make sure that the CMake variable
>> CMAKE_CXX_STANDARD
>> >> is
>> >> >
>> >> > either unset, or set at least to 17.
>> >> >
>> >> >
>> >> >
>> >> > Call Stack (most recent call first):
>> >> >
>> >> > cmake/macros/macro_verbose_include.cmake:18 (include)
>> >> >
>> >> > CMakeLists.txt:116 (verbose_include)
>> >> >
>> >> > -- Configuring incomplete, errors occurred!
>> >> >
>> >> > *Failure with exit status: 1*
>> >> >
>> >> > *Exit message: There was a problem configuring dealii v9.6.1.*
>> >> >
>> >> >
>> >> >
>> >> > On Tue, Dec 31, 2024 at 1:16 PM Matthias Maier <tam...@43-1.org>
>> wrote:
>> >> >
>> >> >> We saw this lately.
>> >> >>
>> >> >> The problem was that, for whatever reason, the Xcode compiler
>> toolchain
>> >> >> forgot to install the C++ standard library (clang/llvm's libc++).
>> >> >>
>> >> >>
>> >> >> Can you try reinstalling the toolchain as described here?
>> >> >>
>> >> >> https://mac.install.guide/commandlinetools/7
>> >> >>
>> >> >>
>> >> >> Best,
>> >> >> Matthias
>> >> >>
>> >> >>
>> >> >>
>> >> >> On Sat, Dec 28, 2024, at 01:41 CST, akash ahmed <
>> ahmed0...@gmail.com>
>> >> >> wrote:
>> >> >>
>> >> >> > Dear all,
>> >> >> > My MacBook Pro has a chip Apple M2 max and macOS Sonoma,
>> >> >> >
>> >> >> > Apple clang version 16.0.0 (clang-1600.0.26.6)
>> >> >> >
>> >> >> > cmake version 3.31.2. However, I got the following error:
>> >> >> >
>> >> >> > ./candi.sh -j 8 --packages="dealii"
>> >> >> >
>> >> >> > *Building dealii v9.6.1*
>> >> >> >
>> >> >> > -- This is CMake 3.31.3
>> >> >> >
>> >> >> > --
>> >> >> >
>> >> >> > .............................................
>> >> >> >
>> >> >> > -- Include
>> >> >> >
>> >> >>
>> >>
>> /Users/mmohebuj/dealii-candi/tmp/unpack/deal.II-v9.6.1/cmake/checks/check_01_cxx_features.cmake
>> >> >> >
>> >> >> > -- C++17 support is disabled.
>> >> >> >
>> >> >> > CMake Error at cmake/checks/check_01_cxx_features.cmake:368
>> (message):
>> >> >> >
>> >> >> >
>> >> >> >
>> >> >> >
>> >> >> > The current version of deal.II requires a compiler with enabled
>> >> C++17
>> >> >> >
>> >> >> > support. Make sure to use a modern enough compiler (GCC
>> version 9
>> >> >> > onwards,
>> >> >> >
>> >> >> > Clang version 10 onwards, or Microsoft MS VS 2019 onwards) and
>> check
>> >> >> that
>> >> >> >
>> >> >> > the compiler flag "-std=" is either unset, or set to at least
>> c++17.
>> >> >> >
>> >> >> > Similarly, please make sure that the CMake variable
>> >> CMAKE_CXX_STANDARD
>> >> >> is
>> >> >> >
>> >> >> > either unset, or set at least to 17.
>> >> >> >
>> >> >> >
>> >> >> >
>> >> >> > Call Stack (most recent call first):
>> >> >> >
>> >> >> > cmake/macros/macro_verbose_include.cmake:18 (include)
>> >> >> >
>> >> >> > CMakeLists.txt:116 (verbose_include)
>> >> >> >
>> >> >> >
>> >> >> > -- Configuring incomplete, errors occurred!
>> >> >> >
>> >> >> > *Failure with exit status: 1*
>> >> >> >
>> >> >> > *Exit message: There was a problem configuring dealii v9.6.1.*
>> >> >> >
>> >> >> > zsh: exit 1 ./candi.sh -j 8 --packages="dealii"
>> >> >> >
>> >> >> >
>> >> >> > It would be a great help if you please share your thoughts on
>> >> resolving
>> >> >> > this issue.
>> >> >> >
>> >> >> > Thank you in advance.
>> >> >> >
>> >> >> > Jaman
>> >> >>
>> >> >> --
>> >> >> The deal.II project is located at http://www.dealii.org/
>> >> >> For mailing list/forum options, see
>> >> >> https://groups.google.com/d/forum/dealii?hl=en
>> >> >> ---
>> >> >> You received this message because you are subscribed to the Google
>> >> Groups
>> >> >> "deal.II User Group" group.
>> >> >> To unsubscribe from this group and stop receiving emails from it,
>> send
>> >> an
>> >> >> email to dealii+unsubscr...@googlegroups.com.
>> >> >> To view this discussion visit
>> >> >> https://groups.google.com/d/msgid/dealii/87h66j7jeq.fsf%4043-1.org.
>> >> >>
>> >>
>> >> --
>> >> The deal.II project is located at http://www.dealii.org/
>> >> For mailing list/forum options, see
>> >> https://groups.google.com/d/forum/dealii?hl=en
>> >> ---
>> >> You received this message because you are subscribed to the Google
>> Groups
>> >> "deal.II User Group" group.
>> >> To unsubscribe from this group and stop receiving emails from it, send
>> an
>> >> email to dealii+unsubscr...@googlegroups.com.
>> >> To view this discussion visit
>> >> https://groups.google.com/d/msgid/dealii/87r05m5lzo.fsf%4043-1.org.
>> >>
>>
>> --
>> The deal.II project is located at http://www.dealii.org/
>> For mailing list/forum options, see
>> https://groups.google.com/d/forum/dealii?hl=en
>> ---
>> You received this message because you are subscribed to the Google Groups
>> "deal.II User Group" group.
>> To unsubscribe from this group and stop receiving emails from it, send an
>> email to dealii+unsubscr...@googlegroups.com.
>> To view this discussion visit
>> https://groups.google.com/d/msgid/dealii/874j2gevr1.fsf%4043-1.org.
>>
>
--
The deal.II project is located at http://www.dealii.org/
For mailing list/forum options, see
https://groups.google.com/d/forum/dealii?hl=en
---
You received this message because you are subscribed to the Google Groups
"deal.II User Group" group.
To unsubscribe from this group and stop receiving emails from it, send an email
to dealii+unsubscr...@googlegroups.com.
To view this discussion visit
https://groups.google.com/d/msgid/dealii/CABoTzfYnPNRspCe6at7W4qjua2-A2H9ZVqQRq57%2BKK-CpxfKCg%40mail.gmail.com.
