Sabyasachi,
What is the boost version of the system-provided boost installation?
You should be able to work around this issue by forcing deal.II to use its
bundled boost package via using `-DDEAL_II_FORCE_BUNDLED_BOOST=ON` when
configuring deal.II.
Best,
Daniel
On Sun, Jun 18, 2023 at 2:01 AM sabyasachi chatterjee <sabya.1...@gmail.com>
wrote:
> Hello,
>
> I recently upgraded to ubuntu 22.04 and the deal ii version I am using is
> 9.1.1. It used to compile fine in ubuntu 20.04. However, now I am seeing
> the following error:
>
>
> ***************************************************************************************
> In file included from
> /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22,
> from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23,
> from
> /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14,
> from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42,
> from
> /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25,
> from /usr/include/boost/smart_ptr/shared_ptr.hpp:29,
> from
> /usr/include/boost/archive/detail/helper_collection.hpp:27,
> from
> /usr/include/boost/archive/detail/basic_iarchive.hpp:28,
> from
> /usr/include/boost/archive/detail/common_iarchive.hpp:21,
> from
> /usr/include/boost/archive/basic_binary_iarchive.hpp:30,
> from
> /usr/include/boost/archive/binary_iarchive_impl.hpp:21,
> from /usr/include/boost/archive/binary_iarchive.hpp:20,
> from
> /home/sabyasachi/Documents/dealii_libraries/dealii_setup/deal.II-v9.1.1/include/deal.II/base/utilities.h:45,
> from
> /home/sabyasachi/Documents/dealii_libraries/dealii_setup/deal.II-v9.1.1/include/deal.II/base/tensor.h:26,
> from
> /home/sabyasachi/Documents/dealii_libraries/dealii_setup/deal.II-v9.1.1/include/deal.II/base/point.h:23,
> from
> /home/sabyasachi/Documents/dealii_libraries/dealii_setup/deal.II-v9.1.1/include/deal.II/base/quadrature.h:22,
> from
> /home/sabyasachi/Documents/dealii_libraries/dealii_setup/deal.II-v9.1.1/include/deal.II/base/quadrature_lib.h:22,
> from
> /home/sabyasachi/Documents/postdoc/irradiated_hardness_test_contact/main_hardness_contact.cc:1:
> /usr/include/boost/detail/no_exceptions_support.hpp:17:1: note: ‘#pragma
> message: This header is deprecated. Use
> <boost/core/no_exceptions_support.hpp> instead.’
> 17 | BOOST_HEADER_DEPRECATED("<boost/core/no_exceptions_support.hpp>")
> | ^~~~~~~~~~~~~~~~~~~~~~~
> In file included from
> /home/sabyasachi/Documents/dealii_libraries/dealii_setup/deal.II-v9.1.1/include/deal.II/grid/grid_tools.h:45,
> from
> /home/sabyasachi/Documents/postdoc/irradiated_hardness_test_contact/main_hardness_contact.cc:33:
> /usr/include/boost/geometry/index/detail/serialization.hpp: In static
> member function ‘static
> boost::geometry::index::detail::rtree::load<MembersHolder>::node_pointer
> boost::geometry::index::detail::rtree::load<MembersHolder>::raw_apply(Archive&,
> unsigned int,
> boost::geometry::index::detail::rtree::load<MembersHolder>::size_type,
> boost::geometry::index::detail::rtree::load<MembersHolder>::size_type&,
> const parameters_type&, const translator_type&,
> boost::geometry::index::detail::rtree::load<MembersHolder>::allocators_type&,
> boost::geometry::index::detail::rtree::load<MembersHolder>::size_type)’:
> /usr/include/boost/geometry/index/detail/serialization.hpp:399:49: error:
> ‘Allocators’ was not declared in this scope; did you mean ‘allocators’?
> 399 | node_pointer n = rtree::create_node<Allocators,
> internal_node>::apply(allocators); // MAY THROW (A)
> | ^~~~~~~~~~
> | allocators
> /usr/include/boost/geometry/index/detail/serialization.hpp:399:74: error:
> template argument 1 is invalid
> 399 | node_pointer n = rtree::create_node<Allocators,
> internal_node>::apply(allocators); // MAY THROW (A)
> |
> ^
> /usr/include/boost/geometry/index/detail/serialization.hpp:422:49: error:
> ‘Allocators’ was not declared in this scope; did you mean ‘allocators’?
> 422 | node_pointer n = rtree::create_node<Allocators,
> leaf>::apply(allocators); // MAY THROW (A)
> | ^~~~~~~~~~
> | allocators
>
> ********************************************************************************************
>
> Probably it is something related to boost library. My code is an extension
> of Step 18 and I think it does not need the boost library. Please suggest
> how to resolve this.
>
> Thanks,
> Sabyasachi
>
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