Great, that solved the problem. Thank you.
The problem was that I had extracted the boost headers locally and had not
built/installed it. David Wells (thanks David!) reported the issue
here: https://github.com/dealii/dealii/issues/14925. Since then, I have
been trying to link one of my projects against deal.ii (copy with bundled
boost) and I get this error:
c++: error: unrecognized command line option ‘-fopenmp-simd’
make[2]: *** [Tests/CodimHeatEquation/CMakeFiles/demo.dir/demo.cc.o] Error 1
make[1]: *** [Tests/CodimHeatEquation/CMakeFiles/demo.dir/all] Error 2
make[1]: *** Waiting for unfinished jobs....
[ 6%] Building CXX object CMakeFiles/fchep.dir/src/Datafile.cpp.o
[ 13%] Building CXX object CMakeFiles/fchep.dir/src/EPSolver.cpp.o
[ 13%] Building CXX object
CMakeFiles/fchep.dir/src/IonicModels/FentonKarma4v.cpp.o
[ 16%] Building CXX object
CMakeFiles/fchep.dir/src/IonicModels/IonicModel.cpp.o
[ 20%] Building CXX object
CMakeFiles/fchep.dir/src/IonicModels/MinimalModel.cpp.o
[ 23%] Building CXX object
CMakeFiles/fchep.dir/src/IonicModels/NashPanfilov.cpp.o
[ 26%] Building CXX object
CMakeFiles/fchep.dir/src/IonicModels/Passive.cpp.o
[ 30%] Building CXX object CMakeFiles/fchep.dir/src/IonicModels/Ryzhii.cpp.o
[ 40%] Building CXX object CMakeFiles/fchep.dir/src/Timer.cpp.o
[ 40%] Building CXX object CMakeFiles/fchep.dir/src/TimeData.cpp.o
[ 40%] Building CXX object
CMakeFiles/fchep.dir/src/IonicModels/vanderPolDuffing.cpp.o
In file included from
/nas/longleaf/home/laryssa/dogwood/sfw/dealii/install-dbg/include/deal.II/bundled/boost/fusion/support/tag_of.hpp:14:0,
from
/nas/longleaf/home/laryssa/dogwood/sfw/dealii/install-dbg/include/deal.II/bundled/boost/fusion/support/category_of.hpp:11,
from
/nas/longleaf/home/laryssa/dogwood/sfw/dealii/install-dbg/include/deal.II/bundled/boost/fusion/adapted/struct/detail/extension.hpp:14,
from
/nas/longleaf/home/laryssa/dogwood/sfw/dealii/install-dbg/include/deal.II/bundled/boost/fusion/adapted/struct/adapt_struct.hpp:22,
from
/nas/longleaf/home/laryssa/dogwood/sfw/dealii/install-dbg/include/deal.II/bundled/boost/fusion/adapted/std_pair.hpp:14,
from
/nas/longleaf/home/laryssa/dogwood/sfw/dealii/install-dbg/include/deal.II/bundled/boost/fusion/include/std_pair.hpp:11,
from /nas/longleaf/home/laryssa/fch-ep/src/Datafile.h:11,
from /nas/longleaf/home/laryssa/fch-ep/src/Datafile.cpp:8:
/nas/longleaf/home/laryssa/dogwood/sfw/dealii/install-dbg/include/deal.II/bundled/boost/fusion/support/detail/is_mpl_sequence.hpp:12:69:
fatal error: boost/fusion/support/detail/is_native_fusion_sequence.hpp: No
such file or directory
#include <boost/fusion/support/detail/is_native_fusion_sequence.hpp>
^
compilation terminated.
Shouldn't fusion be available once I use the bundled version of boost? I am
not sure what to get out of this error message.
Thanks again,
Laryssa
On Monday, March 20, 2023 at 1:51:24 PM UTC-4 Wolfgang Bangerth wrote:
> On 3/19/23 15:47, Laryssa Abdala wrote:
> >
> > I've tried using different versions of boost, but have not been
> > successful with any. I've attached the detailed.log if anyone could help
> > me.
>
> Laryssa, I don't know specifically what causes this error, but you can
> almost certainly avoid it if you use the bundled version of deal.II. I
> believe that you can achieve that by passing
> -DEAL_II_FORCE_BUNDLED_BOOST=ON
> to cmake when you configure. In the output, cmake currently reports
> (based on the file you had attached) this:
> # DEAL_II_WITH_BOOST set up with external dependencies
> With the flag above, it should then say that it is using the 'bundled'
> version of BOOST instead.
>
> Best
> W.
>
>
> --
> ------------------------------------------------------------------------
> Wolfgang Bangerth email: bang...@colostate.edu
> www: http://www.math.colostate.edu/~bangerth/
>
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