Hi Zachary, So it looks like maybe the “-framework Accelerate” is what’s being complained about, but I’m not sure. I also don’t have the latest MacOS, so I can’t inspect this myself. But what you could try to do is build deal.II without BLAS and LAPACK support, and this might prevent this from appearing on the link line. To do this I believe that you should pass the following flags to CMake:
cmake -DLAPACK_FOUND=false -DBLAS_FOUND=false ... The two log are files are located in the directory in which you originally built deal.II. It would be great to see those, because then we can inspect which features have been auto detected during the initial configuration. Best, Jean-Paul > On 31 Jan 2019, at 18:58, Zachary Hardy <zach.ha...@tamu.edu> wrote: > > Hi Jean-Paul, > > Thanks for the response! > > I am running on MacOS 10.14.2, with Xcode 10.1. > > The verbose output is as follows: > /usr/local/Cellar/cmake/3.13.3/bin/cmake -E cmake_link_script > CMakeFiles/step-1.dir/link.txt --verbose=1 > /Library/Developer/CommandLineTools/usr/bin/c++ -Wl,-search_paths_first > -Wl,-headerpad_max_install_names -g -ggdb CMakeFiles/step-1.dir/step-1.cc.o > -o step-1 > /Users/ZachHardy/codes/dealii-9.0.1-installed/lib/libdeal_II.g.9.0.1.dylib > -framework Accelerate -lm -lc /usr/lib/libz.dylib > > Where are the deal.II configuration logs you mentioned located? I am a bit > new, so I am unsure. > > Zachary Hardy '18 > ––––––––––––––––––––––––––––––––––––––––––– > Texas A&M University > B.S. Nuclear Engineering > ––––––––––––––––––––––––––––––––––––––––––– > ––––––––––––––––––––––––––––––––––––––––––– > Cell: (682) 667-3646 > School Email: zach.ha...@tamu.edu <mailto:zach.ha...@tamu.edu> > Personal Email: zhardy1...@gmail.com <mailto:zhardy1...@gmail.com> > > -- > > > On Wed, Jan 30, 2019 at 11:57 PM Jean-Paul Pelteret <jppelte...@gmail.com > <mailto:jppelte...@gmail.com>> wrote: > Dear Zachary, > > I googled this problem and it seems that, dependent on what version of Xcode > and MacOS you’re running, there might be one of two solutions. Here’s a > similar post on the Apple forums that outlines the two possibilities > <https://urldefense.proofpoint.com/v2/url?u=https-3A__forums.developer.apple.com_thread_97850&d=DwMFaQ&c=ODFT-G5SujMiGrKuoJJjVg&r=nizQCYyKabiLGJAOrCZANoq162AR9hpPweEmKQxyveY&m=HOJxNpKM99ijPmOpK6-HFYTTFEkzqyo61wVwWKj8Zks&s=xLb6bS-ywf-0No8b_e_wOiyTH8KQYRLhGrNuzb9alyY&e=>. > The first possible solution (which may only work for older versions of > Xcode) to remove and reinstall the command line tools. The second would be > that the link line generated by CMake is causing the issue. > > This is the selected solution from the Apple forum post > <https://urldefense.proofpoint.com/v2/url?u=https-3A__forums.developer.apple.com_thread_97850&d=DwMFaQ&c=ODFT-G5SujMiGrKuoJJjVg&r=nizQCYyKabiLGJAOrCZANoq162AR9hpPweEmKQxyveY&m=HOJxNpKM99ijPmOpK6-HFYTTFEkzqyo61wVwWKj8Zks&s=xLb6bS-ywf-0No8b_e_wOiyTH8KQYRLhGrNuzb9alyY&e=>: >> You have to link directly to the library and not rely on -isysroot or >> -frameworks in your makefile. you need to link like -L /path/to/lib >> libstuff.dylib > and something that we’d likely have to implement on our side. > > Can you please provide the deal.II configuration logs (detailed.log, > summary.log), tell us more about your system setup (MacOS and Xcode version), > and also provide the verbose output when building one of the tutorial > programs (you can get this using “make VERBOSE=1”). I hope that this might be > sufficient information to help solve this issue. > > Best, > Jean-Paul > >> On 31 Jan 2019, at 03:34, Zachary Hardy <zach.ha...@tamu.edu >> <mailto:zach.ha...@tamu.edu>> wrote: >> >> When I compile the examples, I receive about 12 warning messages about >> linking stating that the text-based stub files and library files are not in >> sync, all from within `/System/Library/Framework/Accelerate.framework.' >> Everything ends up working in the end, but I can't seem to remedy this issue >> to get rid of the warning messages. Has anyone seen this before, and if so, >> what steps can be taken to resolve this issue? Below is an example of the >> warning messages. >> >> ld: warning: text-based stub file >> /System/Library/Frameworks//Accelerate.framework/Accelerate.tbd and library >> file /System/Library/Frameworks//Accelerate.framework/Accelerate are out of >> sync. Falling back to library file for linking. >> >> -- >> The deal.II project is located at http://www.dealii.org/ >> <https://urldefense.proofpoint.com/v2/url?u=http-3A__www.dealii.org_&d=DwMFaQ&c=ODFT-G5SujMiGrKuoJJjVg&r=nizQCYyKabiLGJAOrCZANoq162AR9hpPweEmKQxyveY&m=HOJxNpKM99ijPmOpK6-HFYTTFEkzqyo61wVwWKj8Zks&s=5CLsR_qvHDVn8MkbjQR3Ry6D2PVS_ccQ3TN2JoRmSdw&e=> >> For mailing list/forum options, see >> https://groups.google.com/d/forum/dealii?hl=en >> <https://urldefense.proofpoint.com/v2/url?u=https-3A__groups.google.com_d_forum_dealii-3Fhl-3Den&d=DwMFaQ&c=ODFT-G5SujMiGrKuoJJjVg&r=nizQCYyKabiLGJAOrCZANoq162AR9hpPweEmKQxyveY&m=HOJxNpKM99ijPmOpK6-HFYTTFEkzqyo61wVwWKj8Zks&s=4GletThGMFcMh-5VKjDf3FuSJeL97ax-NI1GftOceak&e=> >> --- >> You received this message because you are subscribed to the Google Groups >> "deal.II User Group" group. >> To unsubscribe from this group and stop receiving emails from it, send an >> email to dealii+unsubscr...@googlegroups.com >> <mailto:dealii+unsubscr...@googlegroups.com>. >> For more options, visit https://groups.google.com/d/optout >> <https://urldefense.proofpoint.com/v2/url?u=https-3A__groups.google.com_d_optout&d=DwMFaQ&c=ODFT-G5SujMiGrKuoJJjVg&r=nizQCYyKabiLGJAOrCZANoq162AR9hpPweEmKQxyveY&m=HOJxNpKM99ijPmOpK6-HFYTTFEkzqyo61wVwWKj8Zks&s=EXMkMx6p0xktYXh8QpOjHbqsPApS5Hez2DNst3IxZpo&e=>. > > > -- > The deal.II project is located at http://www.dealii.org/ > <https://urldefense.proofpoint.com/v2/url?u=http-3A__www.dealii.org_&d=DwMFaQ&c=ODFT-G5SujMiGrKuoJJjVg&r=nizQCYyKabiLGJAOrCZANoq162AR9hpPweEmKQxyveY&m=HOJxNpKM99ijPmOpK6-HFYTTFEkzqyo61wVwWKj8Zks&s=5CLsR_qvHDVn8MkbjQR3Ry6D2PVS_ccQ3TN2JoRmSdw&e=> > For mailing list/forum options, see > https://groups.google.com/d/forum/dealii?hl=en > <https://urldefense.proofpoint.com/v2/url?u=https-3A__groups.google.com_d_forum_dealii-3Fhl-3Den&d=DwMFaQ&c=ODFT-G5SujMiGrKuoJJjVg&r=nizQCYyKabiLGJAOrCZANoq162AR9hpPweEmKQxyveY&m=HOJxNpKM99ijPmOpK6-HFYTTFEkzqyo61wVwWKj8Zks&s=4GletThGMFcMh-5VKjDf3FuSJeL97ax-NI1GftOceak&e=> > --- > You received this message because you are subscribed to the Google Groups > "deal.II User Group" group. > To unsubscribe from this group and stop receiving emails from it, send an > email to dealii+unsubscr...@googlegroups.com > <mailto:dealii+unsubscr...@googlegroups.com>. > For more options, visit https://groups.google.com/d/optout > <https://urldefense.proofpoint.com/v2/url?u=https-3A__groups.google.com_d_optout&d=DwMFaQ&c=ODFT-G5SujMiGrKuoJJjVg&r=nizQCYyKabiLGJAOrCZANoq162AR9hpPweEmKQxyveY&m=HOJxNpKM99ijPmOpK6-HFYTTFEkzqyo61wVwWKj8Zks&s=EXMkMx6p0xktYXh8QpOjHbqsPApS5Hez2DNst3IxZpo&e=>. > > -- > The deal.II project is located at http://www.dealii.org/ > <http://www.dealii.org/> > For mailing list/forum options, see > https://groups.google.com/d/forum/dealii?hl=en > <https://groups.google.com/d/forum/dealii?hl=en> > --- > You received this message because you are subscribed to the Google Groups > "deal.II User Group" group. > To unsubscribe from this group and stop receiving emails from it, send an > email to dealii+unsubscr...@googlegroups.com > <mailto:dealii+unsubscr...@googlegroups.com>. > For more options, visit https://groups.google.com/d/optout > <https://groups.google.com/d/optout>. -- The deal.II project is located at http://www.dealii.org/ For mailing list/forum options, see https://groups.google.com/d/forum/dealii?hl=en --- You received this message because you are subscribed to the Google Groups "deal.II User Group" group. 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