Hello all, I have installed the candi suite on my university cluster: https://www.tu-braunschweig.de/it/dienste/21/phoenix . However, the platform that I had to force was the centos7.platform. Since for the linux_cluster.platform I received the error that is mentioned at the end of this message. My question: Does it matter if I use centos7.platform instead of the linux_cluster.platform? The centos7.platform started its installation directly from parmetis instead of the dependencies.
Thanks and regards, Kartik Jujare TERMINAL OUTPUT: ============================================================================================================================== ******************************************************************************* candi tries now to download, configure, build and install: Project: deal.II-toolchain Platform: ./deal.II-toolchain/platforms/supported/linux_cluster.platform Fetching zlib 1.2.8 Trying to download https://www.ces.clemson.edu/dealii/mirror/zlib-1.2.8.tar.gz curl: (1) Protocol https not supported or disabled in libcurl Trying to download http://zlib.net/zlib-1.2.8.tar.gz curl: (6) Couldn't resolve host 'zlib.net' Trying to download https://www.ces.clemson.edu/dealii/mirror/zlib-1.2.8.tar.gz --2017-10-03 01:51:48-- https://www.ces.clemson.edu/dealii/mirror/zlib-1.2.8.tar.gz Resolving www.ces.clemson.edu (www.ces.clemson.edu)... 130.127.200.19 Connecting to www.ces.clemson.edu (www.ces.clemson.edu)|130.127.200.19|:443... connected. HTTP request sent, awaiting response... 301 Moved Permanently Location: https://cecas.clemson.edu/dealii/mirror/zlib-1.2.8.tar.gz [following] --2017-10-03 01:51:48-- https://cecas.clemson.edu/dealii/mirror/zlib-1.2.8.tar.gz Resolving cecas.clemson.edu (cecas.clemson.edu)... 130.127.200.74 Connecting to cecas.clemson.edu (cecas.clemson.edu)|130.127.200.74|:443... connected. HTTP request sent, awaiting response... 200 OK Length: 571091 (558K) [application/x-gzip] Saving to: ‘zlib-1.2.8.tar.gz’ 100%[==================================================================================================================================================================>] 571.091 944KB/s in 0,6s 2017-10-03 01:51:50 (944 KB/s) - ‘zlib-1.2.8.tar.gz’ saved [571091/571091] Verifying zlib-1.2.8.tar.gz zlib-1.2.8.tar.gz: OK Unpacking zlib-1.2.8.tar.gz Building zlib 1.2.8 Checking for shared library support... Building shared library libz.so.1.2.8 with mpicc. Checking for off64_t... Yes. Checking for fseeko... Yes. Checking for strerror... Yes. Checking for unistd.h... Yes. Checking for stdarg.h... Yes. Checking whether to use vs[n]printf() or s[n]printf()... using vs[n]printf(). Checking for vsnprintf() in stdio.h... Yes. Checking for return value of vsnprintf()... Yes. Checking for attribute(visibility) support... Yes. mpicc -O3 -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -c -o adler32.o adler32.c mpicc -O3 -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -c -o crc32.o crc32.c mpicc -O3 -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -c -o deflate.o deflate.c mpicc -O3 -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -c -o infback.o infback.c mpicc -O3 -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -c -o inffast.o inffast.c mpicc -O3 -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -c -o inflate.o inflate.c mpicc -O3 -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -c -o inftrees.o inftrees.c mpicc -O3 -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -c -o trees.o trees.c mpicc -O3 -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -c -o zutil.o zutil.c mpicc -O3 -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -c -o compress.o compress.c mpicc -O3 -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -c -o uncompr.o uncompr.c mpicc -O3 -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -c -o gzclose.o gzclose.c mpicc -O3 -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -c -o gzlib.o gzlib.c mpicc -O3 -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -c -o gzread.o gzread.c mpicc -O3 -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -c -o gzwrite.o gzwrite.c ar rc libz.a adler32.o crc32.o deflate.o infback.o inffast.o inflate.o inftrees.o trees.o zutil.o compress.o uncompr.o gzclose.o gzlib.o gzread.o gzwrite.o mpicc -O3 -fPIC -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DPIC -c -o objs/adler32.o adler32.c mpicc -O3 -fPIC -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DPIC -c -o objs/crc32.o crc32.c mpicc -O3 -fPIC -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DPIC -c -o objs/deflate.o deflate.c mpicc -O3 -fPIC -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DPIC -c -o objs/infback.o infback.c mpicc -O3 -fPIC -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DPIC -c -o objs/inffast.o inffast.c mpicc -O3 -fPIC -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DPIC -c -o objs/inflate.o inflate.c mpicc -O3 -fPIC -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DPIC -c -o objs/inftrees.o inftrees.c mpicc -O3 -fPIC -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DPIC -c -o objs/trees.o trees.c mpicc -O3 -fPIC -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DPIC -c -o objs/zutil.o zutil.c mpicc -O3 -fPIC -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DPIC -c -o objs/compress.o compress.c mpicc -O3 -fPIC -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DPIC -c -o objs/uncompr.o uncompr.c mpicc -O3 -fPIC -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DPIC -c -o objs/gzclose.o gzclose.c mpicc -O3 -fPIC -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DPIC -c -o objs/gzlib.o gzlib.c mpicc -O3 -fPIC -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DPIC -c -o objs/gzread.o gzread.c mpicc -O3 -fPIC -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -DPIC -c -o objs/gzwrite.o gzwrite.c mpicc -shared -Wl,-soname,libz.so.1,--version-script,zlib.map -O3 -fPIC -D_LARGEFILE64_SOURCE=1 -DHAVE_HIDDEN -o libz.so.1.2.8 adler32.lo crc32.lo deflate.lo infback.lo inffast.lo inflate.lo inftrees.lo trees.lo zutil.lo compress.lo uncompr.lo gzclose.lo gzlib.lo gzread.lo gzwrite.lo -lc rm -f libz.so libz.so.1 ln -s libz.so.1.2.8 libz.so ln -s libz.so.1.2.8 libz.so.1 cp libz.a /home/i1000475/deal.ii-candi/zlib-1.2.8/lib chmod 644 /home/i1000475/deal.ii-candi/zlib-1.2.8/lib/libz.a cp libz.so.1.2.8 /home/i1000475/deal.ii-candi/zlib-1.2.8/lib chmod 755 /home/i1000475/deal.ii-candi/zlib-1.2.8/lib/libz.so.1.2.8 cp zlib.3 /home/i1000475/deal.ii-candi/zlib-1.2.8/share/man/man3 chmod 644 /home/i1000475/deal.ii-candi/zlib-1.2.8/share/man/man3/zlib.3 cp zlib.pc /home/i1000475/deal.ii-candi/zlib-1.2.8/lib/pkgconfig chmod 644 /home/i1000475/deal.ii-candi/zlib-1.2.8/lib/pkgconfig/zlib.pc cp zlib.h zconf.h /home/i1000475/deal.ii-candi/zlib-1.2.8/include chmod 644 /home/i1000475/deal.ii-candi/zlib-1.2.8/include/zlib.h /home/i1000475/deal.ii-candi/zlib-1.2.8/include/zconf.h Fetching bzip2 1.0.6 Trying to download https://www.ces.clemson.edu/dealii/mirror/bzip2-1.0.6.tar.gz curl: (1) Protocol https not supported or disabled in libcurl Trying to download http://www.bzip.org/1.0.6/bzip2-1.0.6.tar.gz curl: (6) Couldn't resolve host 'www.bzip.org' Trying to download https://www.ces.clemson.edu/dealii/mirror/bzip2-1.0.6.tar.gz --2017-10-03 01:52:14-- https://www.ces.clemson.edu/dealii/mirror/bzip2-1.0.6.tar.gz Resolving www.ces.clemson.edu (www.ces.clemson.edu)... 130.127.200.19 Connecting to www.ces.clemson.edu (www.ces.clemson.edu)|130.127.200.19|:443... connected. HTTP request sent, awaiting response... 301 Moved Permanently Location: https://cecas.clemson.edu/dealii/mirror/bzip2-1.0.6.tar.gz [following] --2017-10-03 01:52:14-- https://cecas.clemson.edu/dealii/mirror/bzip2-1.0.6.tar.gz Resolving cecas.clemson.edu (cecas.clemson.edu)... 130.127.200.74 Connecting to cecas.clemson.edu (cecas.clemson.edu)|130.127.200.74|:443... connected. HTTP request sent, awaiting response... 200 OK Length: 782025 (764K) [application/x-gzip] Saving to: ‘bzip2-1.0.6.tar.gz’ 100%[==================================================================================================================================================================>] 782.025 1,19MB/s in 0,6s 2017-10-03 01:52:16 (1,19 MB/s) - ‘bzip2-1.0.6.tar.gz’ saved [782025/782025] Verifying bzip2-1.0.6.tar.gz bzip2-1.0.6.tar.gz: OK Unpacking bzip2-1.0.6.tar.gz Building bzip2 1.0.6 patching file Makefile If compilation produces errors, or a large number of warnings, please read README.COMPILATION.PROBLEMS -- you might be able to adjust the flags in this Makefile to improve matters. Also in README.COMPILATION.PROBLEMS are some hints that may help if your build produces an executable which is unable to correctly handle so-called 'large files' -- files of size 2GB or more. mpicc -Wall -fPIC -Winline -O2 -g -D_FILE_OFFSET_BITS=64 -c blocksort.c warning #11071: Inline not honored for call mainSimpleSort(UInt32 *, UChar *, UInt16 *, Int32, Int32, Int32, Int32, Int32 *)->mainGtU(UInt32, UInt32, UChar *, UInt16 *, UInt32, Int32 *) in file blocksort.c line 542 column 18 warning #11071: Inline not honored for call mainSimpleSort(UInt32 *, UChar *, UInt16 *, Int32, Int32, Int32, Int32, Int32 *)->mainGtU(UInt32, UInt32, UChar *, UInt16 *, UInt32, Int32 *) in file blocksort.c line 542 column 18 warning #11071: Inline not honored for call mainSimpleSort(UInt32 *, UChar *, UInt16 *, Int32, Int32, Int32, Int32, Int32 *)->mainGtU(UInt32, UInt32, UChar *, UInt16 *, UInt32, Int32 *) in file blocksort.c line 528 column 18 mpicc -Wall -fPIC -Winline -O2 -g -D_FILE_OFFSET_BITS=64 -c huffman.c mpicc -Wall -fPIC -Winline -O2 -g -D_FILE_OFFSET_BITS=64 -c crctable.c mpicc -Wall -fPIC -Winline -O2 -g -D_FILE_OFFSET_BITS=64 -c randtable.c mpicc -Wall -fPIC -Winline -O2 -g -D_FILE_OFFSET_BITS=64 -c compress.c warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 584 column 13 warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 577 column 52 warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 577 column 39 warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 577 column 26 warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 577 column 13 warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 576 column 65 warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 576 column 52 warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 576 column 39 warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 576 column 26 warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 576 column 13 warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 575 column 65 warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 575 column 52 warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 575 column 39 warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 575 column 26 warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 575 column 13 warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 574 column 65 warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 574 column 52 warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 574 column 39 warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 574 column 26 warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 574 column 13 warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 573 column 65 warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 573 column 52 warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 573 column 39 warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 573 column 26 warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 573 column 13 warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 572 column 65 warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 572 column 52 warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 572 column 39 warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 572 column 26 warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 572 column 13 warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 571 column 65 warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 571 column 52 warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 571 column 39 warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 571 column 26 warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 571 column 13 warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 570 column 65 warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 570 column 52 warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 570 column 39 warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 570 column 26 warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 570 column 13 warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 569 column 65 warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 569 column 52 warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 569 column 39 warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 569 column 26 warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 569 column 13 warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 568 column 65 warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 568 column 52 warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 568 column 39 warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 568 column 26 warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 568 column 13 warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 577 column 65 warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 536 column 40 warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 535 column 40 warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 537 column 10 warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 533 column 7 warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 522 column 47 warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 523 column 7 warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 520 column 4 warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 510 column 59 warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 510 column 42 warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 519 column 4 warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 505 column 43 warning #11071: Inline not honored for call sendMTFValues(EState *)->bsW(EState *, Int32, UInt32) in file compress.c line 505 column 26 mpicc -Wall -fPIC -Winline -O2 -g -D_FILE_OFFSET_BITS=64 -c decompress.c mpicc -Wall -fPIC -Winline -O2 -g -D_FILE_OFFSET_BITS=64 -c bzlib.c rm -f libbz2.a ar cq libbz2.a blocksort.o huffman.o crctable.o randtable.o compress.o decompress.o bzlib.o ranlib libbz2.a mpicc -Wall -fPIC -Winline -O2 -g -D_FILE_OFFSET_BITS=64 -c bzip2.c mpicc -Wall -fPIC -Winline -O2 -g -D_FILE_OFFSET_BITS=64 -o bzip2 bzip2.o -L. -lbz2 mpicc -Wall -fPIC -Winline -O2 -g -D_FILE_OFFSET_BITS=64 -c bzip2recover.c mpicc -Wall -fPIC -Winline -O2 -g -D_FILE_OFFSET_BITS=64 -o bzip2recover bzip2recover.o if ( test ! -d /home/i1000475/deal.ii-candi/bzip2-1.0.6/bzip2-1.0.6/bin ) ; then mkdir -p /home/i1000475/deal.ii-candi/bzip2-1.0.6/bzip2-1.0.6/bin ; fi if ( test ! -d /home/i1000475/deal.ii-candi/bzip2-1.0.6/bzip2-1.0.6/lib ) ; then mkdir -p /home/i1000475/deal.ii-candi/bzip2-1.0.6/bzip2-1.0.6/lib ; fi if ( test ! -d /home/i1000475/deal.ii-candi/bzip2-1.0.6/bzip2-1.0.6/man ) ; then mkdir -p /home/i1000475/deal.ii-candi/bzip2-1.0.6/bzip2-1.0.6/man ; fi if ( test ! -d /home/i1000475/deal.ii-candi/bzip2-1.0.6/bzip2-1.0.6/man/man1 ) ; then mkdir -p /home/i1000475/deal.ii-candi/bzip2-1.0.6/bzip2-1.0.6/man/man1 ; fi if ( test ! -d /home/i1000475/deal.ii-candi/bzip2-1.0.6/bzip2-1.0.6/include ) ; then mkdir -p /home/i1000475/deal.ii-candi/bzip2-1.0.6/bzip2-1.0.6/include ; fi cp -f bzip2 /home/i1000475/deal.ii-candi/bzip2-1.0.6/bzip2-1.0.6/bin/bzip2 cp -f bzip2 /home/i1000475/deal.ii-candi/bzip2-1.0.6/bzip2-1.0.6/bin/bunzip2 cp -f bzip2 /home/i1000475/deal.ii-candi/bzip2-1.0.6/bzip2-1.0.6/bin/bzcat cp -f bzip2recover /home/i1000475/deal.ii-candi/bzip2-1.0.6/bzip2-1.0.6/bin/bzip2recover chmod a+x /home/i1000475/deal.ii-candi/bzip2-1.0.6/bzip2-1.0.6/bin/bzip2 chmod a+x /home/i1000475/deal.ii-candi/bzip2-1.0.6/bzip2-1.0.6/bin/bunzip2 chmod a+x /home/i1000475/deal.ii-candi/bzip2-1.0.6/bzip2-1.0.6/bin/bzcat chmod a+x /home/i1000475/deal.ii-candi/bzip2-1.0.6/bzip2-1.0.6/bin/bzip2recover cp -f bzip2.1 /home/i1000475/deal.ii-candi/bzip2-1.0.6/bzip2-1.0.6/man/man1 chmod a+r /home/i1000475/deal.ii-candi/bzip2-1.0.6/bzip2-1.0.6/man/man1/bzip2.1 cp -f bzlib.h /home/i1000475/deal.ii-candi/bzip2-1.0.6/bzip2-1.0.6/include chmod a+r /home/i1000475/deal.ii-candi/bzip2-1.0.6/bzip2-1.0.6/include/bzlib.h cp -f libbz2.a /home/i1000475/deal.ii-candi/bzip2-1.0.6/bzip2-1.0.6/lib chmod a+r /home/i1000475/deal.ii-candi/bzip2-1.0.6/bzip2-1.0.6/lib/libbz2.a cp -f bzgrep /home/i1000475/deal.ii-candi/bzip2-1.0.6/bzip2-1.0.6/bin/bzgrep ln -s -f /home/i1000475/deal.ii-candi/bzip2-1.0.6/bzip2-1.0.6/bin/bzgrep /home/i1000475/deal.ii-candi/bzip2-1.0.6/bzip2-1.0.6/bin/bzegrep ln -s -f /home/i1000475/deal.ii-candi/bzip2-1.0.6/bzip2-1.0.6/bin/bzgrep /home/i1000475/deal.ii-candi/bzip2-1.0.6/bzip2-1.0.6/bin/bzfgrep chmod a+x /home/i1000475/deal.ii-candi/bzip2-1.0.6/bzip2-1.0.6/bin/bzgrep cp -f bzmore /home/i1000475/deal.ii-candi/bzip2-1.0.6/bzip2-1.0.6/bin/bzmore ln -s -f /home/i1000475/deal.ii-candi/bzip2-1.0.6/bzip2-1.0.6/bin/bzmore /home/i1000475/deal.ii-candi/bzip2-1.0.6/bzip2-1.0.6/bin/bzless chmod a+x /home/i1000475/deal.ii-candi/bzip2-1.0.6/bzip2-1.0.6/bin/bzmore cp -f bzdiff /home/i1000475/deal.ii-candi/bzip2-1.0.6/bzip2-1.0.6/bin/bzdiff ln -s -f /home/i1000475/deal.ii-candi/bzip2-1.0.6/bzip2-1.0.6/bin/bzdiff /home/i1000475/deal.ii-candi/bzip2-1.0.6/bzip2-1.0.6/bin/bzcmp chmod a+x /home/i1000475/deal.ii-candi/bzip2-1.0.6/bzip2-1.0.6/bin/bzdiff cp -f bzgrep.1 bzmore.1 bzdiff.1 /home/i1000475/deal.ii-candi/bzip2-1.0.6/bzip2-1.0.6/man/man1 chmod a+r /home/i1000475/deal.ii-candi/bzip2-1.0.6/bzip2-1.0.6/man/man1/bzgrep.1 chmod a+r /home/i1000475/deal.ii-candi/bzip2-1.0.6/bzip2-1.0.6/man/man1/bzmore.1 chmod a+r /home/i1000475/deal.ii-candi/bzip2-1.0.6/bzip2-1.0.6/man/man1/bzdiff.1 echo ".so man1/bzgrep.1" > /home/i1000475/deal.ii-candi/bzip2-1.0.6/bzip2-1.0.6/man/man1/bzegrep.1 echo ".so man1/bzgrep.1" > /home/i1000475/deal.ii-candi/bzip2-1.0.6/bzip2-1.0.6/man/man1/bzfgrep.1 echo ".so man1/bzmore.1" > /home/i1000475/deal.ii-candi/bzip2-1.0.6/bzip2-1.0.6/man/man1/bzless.1 echo ".so man1/bzdiff.1" > /home/i1000475/deal.ii-candi/bzip2-1.0.6/bzip2-1.0.6/man/man1/bzcmp.1 Fetching boost 1_63_0 Trying to download https://www.ces.clemson.edu/dealii/mirror/boost_1_63_0.tar.gz curl: (1) Protocol https not supported or disabled in libcurl Trying to download http://downloads.sourceforge.net/boost/boost_1_63_0.tar.gz curl: (6) Couldn't resolve host 'downloads.sourceforge.net' Trying to download https://www.ces.clemson.edu/dealii/mirror/boost_1_63_0.tar.gz --2017-10-03 01:52:26-- https://www.ces.clemson.edu/dealii/mirror/boost_1_63_0.tar.gz Resolving www.ces.clemson.edu (www.ces.clemson.edu)... 130.127.200.19 Connecting to www.ces.clemson.edu (www.ces.clemson.edu)|130.127.200.19|:443... connected. HTTP request sent, awaiting response... 301 Moved Permanently Location: https://cecas.clemson.edu/dealii/mirror/boost_1_63_0.tar.gz [following] --2017-10-03 01:52:27-- https://cecas.clemson.edu/dealii/mirror/boost_1_63_0.tar.gz Resolving cecas.clemson.edu (cecas.clemson.edu)... 130.127.200.74 Connecting to cecas.clemson.edu (cecas.clemson.edu)|130.127.200.74|:443... connected. HTTP request sent, awaiting response... 200 OK Length: 97518330 (93M) [application/x-gzip] Saving to: ‘boost_1_63_0.tar.gz’ 100%[==================================================================================================================================================================>] 97.518.330 20,0MB/s in 6,2s 2017-10-03 01:52:34 (15,0 MB/s) - ‘boost_1_63_0.tar.gz’ saved [97518330/97518330] Verifying boost_1_63_0.tar.gz boost_1_63_0.tar.gz: OK Unpacking boost_1_63_0.tar.gz Building boost 1_63_0 Building Boost.Build engine with toolset gcc... tools/build/src/engine/bin.linuxx86_64/b2 Detecting Python version... 2.7 Detecting Python root... /usr Unicode/ICU support for Boost.Regex?... /usr Generating Boost.Build configuration in project-config.jam... Bootstrapping is done. To build, run: ./b2 To adjust configuration, edit 'project-config.jam'. Further information: - Command line help: ./b2 --help - Getting started guide: http://www.boost.org/more/getting_started/unix-variants.html - Boost.Build documentation: http://www.boost.org/build/doc/html/index.html Performing configuration checks - 32-bit : no - 64-bit : yes - arm : no - mips1 : no - power : no - sparc : no - x86 : yes - symlinks supported : yes - C++11 mutex : yes - lockfree boost::atomic_flag : yes - Boost.Config Feature Check: cxx11_auto_declarations : yes - Boost.Config Feature Check: cxx11_constexpr : yes - Boost.Config Feature Check: cxx11_defaulted_functions : yes - Boost.Config Feature Check: cxx11_final : yes - Boost.Config Feature Check: cxx11_hdr_mutex : yes - Boost.Config Feature Check: cxx11_hdr_tuple : yes - Boost.Config Feature Check: cxx11_lambdas : yes - Boost.Config Feature Check: cxx11_noexcept : yes - Boost.Config Feature Check: cxx11_nullptr : yes - Boost.Config Feature Check: cxx11_rvalue_references : yes - Boost.Config Feature Check: cxx11_template_aliases : yes - Boost.Config Feature Check: cxx11_thread_local : yes - Boost.Config Feature Check: cxx11_variadic_templates : yes - has_icu builds : yes - zlib : yes error: at /beegfs/home/i1000475/deal.ii-candi/tmp/build/boost_1_63_0/tools/build/src/kernel/modules.jam:107 error: Name clash for '<pcandi_build_dir/boost/bin.v2/standalone/ac/gcc-6.3.0/release/threading-multi>main.o' error: error: Tried to build the target twice, with property sets having error: these incompatible properties: error: error: - <dll-path>/home/i1000475/deal.ii-candi/zlib-1.2.8/lib <library-path>/home/i1000475/deal.ii-candi/zlib-1.2.8/lib <xdll-path>/home/i1000475/deal.ii-candi/zlib-1.2.8/lib error: - <dll-path>/home/i1000475/deal.ii-candi/bzip2-1.0.6/lib <library-path>/home/i1000475/deal.ii-candi/bzip2-1.0.6/lib <xdll-path>/home/i1000475/deal.ii-candi/bzip2-1.0.6/lib error: error: Please make sure to have consistent requirements for these error: properties everywhere in your project, especially for install error: targets. Failure with exit status: 1 Exit message: There was a problem building boost 1_63_0. ============================================================================================================================== -- The deal.II project is located at http://www.dealii.org/ For mailing list/forum options, see https://groups.google.com/d/forum/dealii?hl=en --- You received this message because you are subscribed to the Google Groups "deal.II User Group" group. To unsubscribe from this group and stop receiving emails from it, send an email to dealii+unsubscr...@googlegroups.com. For more options, visit https://groups.google.com/d/optout.
