Hi Bruno,
I am using PETSc 3.6 with SLEPc 3.6 to compile deal-ii. However, I get the
following error:
In file included from
/home/nitish/Softwares/dealii/include/deal.II/lac/slepc_spectral_transformation.h:29:0,
from
/home/nitish/Softwares/dealii/include/deal.II/lac/slepc_solver.h:26,
from /home/nitish/Softwares/dealii/source/base/mpi.cc:45:
/usr/include/slepc/slepceps.h: In function ‘PetscErrorCode
EPSViewFromOptions(EPS, PetscObject, const char*)’:
/usr/include/slepc/slepceps.h:203:158: error: cannot convert ‘PetscObject
{aka _p_PetscObject*}’ to ‘const char*’ for argument ‘2’ to ‘PetscErrorCode
PetscObjectViewFromOptions(PetscObject, const char*, const char*)’
PETSC_STATIC_INLINE PetscErrorCode EPSViewFromOptions(EPS eps,PetscObject
obj,const char name[]) {return
PetscObjectViewFromOptions((PetscObject)eps,obj,name);}
^
/usr/include/slepc/slepceps.h: At global scope:
/usr/include/slepc/slepceps.h:256:181: error: ‘PetscViewerAndFormat’ has
not been declared
PETSC_EXTERN PetscErrorCode EPSMonitorSetFromOptions(EPS,const char*,const
char*,const char*,PetscErrorCode
(*)(EPS,PetscInt,PetscInt,PetscScalar*,PetscScalar*,PetscReal*,PetscInt,PetscViewerAndFormat*),PetscBool);
^
/usr/include/slepc/slepceps.h:274:113: error: ‘PetscViewerAndFormat’ has
not been declared
PETSC_EXTERN PetscErrorCode
EPSMonitorFirst(EPS,PetscInt,PetscInt,PetscScalar*,PetscScalar*,PetscReal*,PetscInt,PetscViewerAndFormat*);
^
/usr/include/slepc/slepceps.h:275:111: error: ‘PetscViewerAndFormat’ has
not been declared
PETSC_EXTERN PetscErrorCode
EPSMonitorAll(EPS,PetscInt,PetscInt,PetscScalar*,PetscScalar*,PetscReal*,PetscInt,PetscViewerAndFormat*);
^
make[2]: *** [source/base/CMakeFiles/obj_base_release.dir/mpi.cc.o] Error 1
make[1]: *** [source/base/CMakeFiles/obj_base_release.dir/all] Error 2
make[1]: *** Waiting for unfinished jobs....
In file included from
/home/nitish/Softwares/dealii/include/deal.II/lac/slepc_spectral_transformation.h:29:0,
from
/home/nitish/Softwares/dealii/include/deal.II/lac/petsc_solver.h:32,
from
/home/nitish/Softwares/dealii/source/lac/petsc_precondition.cc:25:
/usr/include/slepc/slepceps.h: In function ‘PetscErrorCode
EPSViewFromOptions(EPS, PetscObject, const char*)’:
/usr/include/slepc/slepceps.h:203:158: error: cannot convert ‘PetscObject
{aka _p_PetscObject*}’ to ‘const char*’ for argument ‘2’ to ‘PetscErrorCode
PetscObjectViewFromOptions(PetscObject, const char*, const char*)’
PETSC_STATIC_INLINE PetscErrorCode EPSViewFromOptions(EPS eps,PetscObject
obj,const char name[]) {return
PetscObjectViewFromOptions((PetscObject)eps,obj,name);}
^
/usr/include/slepc/slepceps.h: At global scope:
/usr/include/slepc/slepceps.h:256:181: error: ‘PetscViewerAndFormat’ has
not been declared
PETSC_EXTERN PetscErrorCode EPSMonitorSetFromOptions(EPS,const char*,const
char*,const char*,PetscErrorCode
(*)(EPS,PetscInt,PetscInt,PetscScalar*,PetscScalar*,PetscReal*,PetscInt,PetscViewerAndFormat*),PetscBool);
^
/usr/include/slepc/slepceps.h:274:113: error: ‘PetscViewerAndFormat’ has
not been declared
PETSC_EXTERN PetscErrorCode
EPSMonitorFirst(EPS,PetscInt,PetscInt,PetscScalar*,PetscScalar*,PetscReal*,PetscInt,PetscViewerAndFormat*);
^
/usr/include/slepc/slepceps.h:275:111: error: ‘PetscViewerAndFormat’ has
not been declared
PETSC_EXTERN PetscErrorCode
EPSMonitorAll(EPS,PetscInt,PetscInt,PetscScalar*,PetscScalar*,PetscReal*,PetscInt,PetscViewerAndFormat*);
^
make[2]: ***
[source/lac/CMakeFiles/obj_lac_release.dir/petsc_precondition.cc.o] Error 1
make[2]: *** Waiting for unfinished jobs....
make[1]: *** [source/lac/CMakeFiles/obj_lac_release.dir/all] Error 2
make: *** [all] Error 2
Any suggestions ??
Thanks,
Nitish
On Monday, June 13, 2016 at 2:04:04 PM UTC+2, Bruno Turcksin wrote:
>
> Hi,
>
> we don't support PETSc 3.7 yet
> https://github.com/dealii/dealii/issues/2677 Use PETSc 3.6 instead.
>
> Best,
>
> Bruno
>
> On Monday, June 13, 2016 at 5:02:50 AM UTC-4, Roc Wang wrote:
>>
>> Hi,
>>
>> I configured cmake successfully, the detaled cmake configuration is
>> attached.
>>
>> However, I got the following errors at about 67% installation, I
>> searched the topic in this group post, and just got one similar post by
>> Craig
>> Michoski <https://plus.google.com/u/0/107274907969610636597?prsrc=4> @
>> https://groups.google.com/forum/?hl=en#!searchin/dealii/petsc_precondition.cc.o$20failed/dealii/G4pOuHWoDVM/U_A2LGvZU0QJ,
>>
>> but it seems Craig's is not my case. Could please someone help me on this?
>> Thanks.
>>
>>
>> ====
>>
>> [ 67%] Building CXX object
>> source/lac/CMakeFiles/obj_lac.release.dir/petsc_precondition.cc.o
>> /mnt/LINUX_APP/ZSoft-Leap/dealii-8.4.1/source/lac/petsc_precondition.cc:
>> In member function ‘void dealii::PETScWrappers::Precond
>> itionBoomerAMG::initialize()’:
>> /mnt/LINUX_APP/ZSoft-Leap/dealii-8.4.1/source/lac/petsc_precondition.cc:490:70:
>>
>> error: cannot convert ‘const char*’ to ‘PetscOpt
>> ions {aka _n_PetscOptions*}’ for argument ‘1’ to ‘PetscErrorCode
>> PetscOptionsSetValue(PetscOptions, const char*, const char*)’
>> PetscOptionsSetValue("-pc_hypre_boomeramg_print_statistics","1");
>> ^
>> /mnt/LINUX_APP/ZSoft-Leap/dealii-8.4.1/source/lac/petsc_precondition.cc:495:35:
>>
>> error: cannot convert ‘const char*’ to ‘PetscOpt
>> ions {aka _n_PetscOptions*}’ for argument ‘1’ to ‘PetscErrorCode
>> PetscOptionsSetValue(PetscOptions, const char*, const char*)’
>> ).c_str());
>> ^
>> /mnt/LINUX_APP/ZSoft-Leap/dealii-8.4.1/source/lac/petsc_precondition.cc:499:83:
>>
>> error: cannot convert ‘const char*’ to ‘PetscOpt
>> ions {aka _n_PetscOptions*}’ for argument ‘1’ to ‘PetscErrorCode
>> PetscOptionsSetValue(PetscOptions, const char*, const char*)’
>> PetscOptionsSetValue("-pc_hypre_boomeramg_max_row_sum",
>> ssStream.str().c_str());
>>
>> ^
>>
>> /mnt/LINUX_APP/ZSoft-Leap/dealii-8.4.1/source/lac/petsc_precondition.cc:503:88:
>>
>> error: cannot convert ‘const char*’ to ‘PetscOpt
>> ions {aka _n_PetscOptions*}’ for argument ‘1’ to ‘PetscErrorCode
>> PetscOptionsSetValue(PetscOptions, const char*, const char*)’
>> PetscOptionsSetValue("-pc_hypre_boomeramg_strong_threshold",
>> ssStream.str().c_str());
>>
>> ^
>>
>> /mnt/LINUX_APP/ZSoft-Leap/dealii-8.4.1/source/lac/petsc_precondition.cc:507:89:
>>
>> error: cannot convert ‘const char*’ to ‘PetscOpt
>> ions {aka _n_PetscOptions*}’ for argument ‘1’ to ‘PetscErrorCode
>> PetscOptionsSetValue(PetscOptions, const char*, const char*)’
>> PetscOptionsSetValue("-pc_hypre_boomeramg_relax_type_up",
>> "symmetric-SOR/Jacobi");
>>
>> ^
>>
>> /mnt/LINUX_APP/ZSoft-Leap/dealii-8.4.1/source/lac/petsc_precondition.cc:508:91:
>>
>> error: cannot convert ‘const char*’ to ‘PetscOpt
>> ions {aka _n_PetscOptions*}’ for argument ‘1’ to ‘PetscErrorCode
>> PetscOptionsSetValue(PetscOptions, const char*, const char*)’
>> PetscOptionsSetValue("-pc_hypre_boomeramg_relax_type_down",
>> "symmetric-SOR/Jacobi");
>>
>> ^
>>
>> /mnt/LINUX_APP/ZSoft-Leap/dealii-8.4.1/source/lac/petsc_precondition.cc:509:93:
>>
>> error: cannot convert ‘const char*’ to ‘PetscOpt
>> ions {aka _n_PetscOptions*}’ for argument ‘1’ to ‘PetscErrorCode
>> PetscOptionsSetValue(PetscOptions, const char*, const char*)’
>> PetscOptionsSetValue("-pc_hypre_boomeramg_relax_type_coarse",
>> "Gaussian-elimination");
>>
>> ^
>>
>> /mnt/LINUX_APP/ZSoft-Leap/dealii-8.4.1/source/lac/petsc_precondition.cc:513:79:
>>
>> error: cannot convert ‘const char*’ to ‘PetscOpt
>> ions {aka _n_PetscOptions*}’ for argument ‘1’ to ‘PetscErrorCode
>> PetscOptionsSetValue(PetscOptions, const char*, const char*)’
>> PetscOptionsSetValue("-pc_hypre_boomeramg_relax_type_up",
>> "SOR/Jacobi");
>>
>> ^
>>
>> /mnt/LINUX_APP/ZSoft-Leap/dealii-8.4.1/source/lac/petsc_precondition.cc:514:81:
>>
>> error: cannot convert ‘const char*’ to ‘PetscOpt
>> ions {aka _n_PetscOptions*}’ for argument ‘1’ to ‘PetscErrorCode
>> PetscOptionsSetValue(PetscOptions, const char*, const char*)’
>> PetscOptionsSetValue("-pc_hypre_boomeramg_relax_type_down",
>> "SOR/Jacobi");
>>
>> ^
>>
>> /mnt/LINUX_APP/ZSoft-Leap/dealii-8.4.1/source/lac/petsc_precondition.cc:515:93:
>>
>> error: cannot convert ‘const char*’ to ‘PetscOpt
>> ions {aka _n_PetscOptions*}’ for argument ‘1’ to ‘PetscErrorCode
>> PetscOptionsSetValue(PetscOptions, const char*, const char*)’
>> PetscOptionsSetValue("-pc_hypre_boomeramg_relax_type_coarse",
>> "Gaussian-elimination");
>>
>> ^
>>
>> /mnt/LINUX_APP/ZSoft-Leap/dealii-8.4.1/source/lac/petsc_precondition.cc:
>> In member function ‘void dealii::PETScWrappers::Precond
>> itionParaSails::initialize(const dealii::PETScWrappers::MatrixBase&,
>> const dealii::PETScWrappers::PreconditionParaSails::Additio
>> nalData&)’:
>> /mnt/LINUX_APP/ZSoft-Leap/dealii-8.4.1/source/lac/petsc_precondition.cc:591:61:
>>
>> error: cannot convert ‘const char*’ to ‘PetscOpt
>> ions {aka _n_PetscOptions*}’ for argument ‘1’ to ‘PetscErrorCode
>> PetscOptionsSetValue(PetscOptions, const char*, const char*)’
>> PetscOptionsSetValue("-pc_hypre_parasails_logging","1");
>> ^
>> /mnt/LINUX_APP/ZSoft-Leap/dealii-8.4.1/source/lac/petsc_precondition.cc:625:74:
>>
>> error: cannot convert ‘const char*’ to ‘PetscOpt
>> ions {aka _n_PetscOptions*}’ for argument ‘1’ to ‘PetscErrorCode
>> PetscOptionsSetValue(PetscOptions, const char*, const char*)’
>> PetscOptionsSetValue("-pc_hypre_parasails_sym",ssStream.str().c_str());
>>
>> ^
>>
>> /mnt/LINUX_APP/ZSoft-Leap/dealii-8.4.1/source/lac/petsc_precondition.cc:630:35:
>>
>> error: cannot convert ‘const char*’ to ‘PetscOpt
>> ions {aka _n_PetscOptions*}’ for argument ‘1’ to ‘PetscErrorCode
>> PetscOptionsSetValue(PetscOptions, const char*, const char*)’
>> ).c_str());
>> ^
>> /mnt/LINUX_APP/ZSoft-Leap/dealii-8.4.1/source/lac/petsc_precondition.cc:634:78:
>>
>> error: cannot convert ‘const char*’ to ‘PetscOpt
>> ions {aka _n_PetscOptions*}’ for argument ‘1’ to ‘PetscErrorCode
>> PetscOptionsSetValue(PetscOptions, const char*, const char*)’
>> PetscOptionsSetValue("-pc_hypre_parasails_thresh",
>> ssStream.str().c_str());
>>
>> ^
>>
>> /mnt/LINUX_APP/ZSoft-Leap/dealii-8.4.1/source/lac/petsc_precondition.cc:638:78:
>>
>> error: cannot convert ‘const char*’ to ‘PetscOpt
>> ions {aka _n_PetscOptions*}’ for argument ‘1’ to ‘PetscErrorCode
>> PetscOptionsSetValue(PetscOptions, const char*, const char*)’
>> PetscOptionsSetValue("-pc_hypre_parasails_filter",
>> ssStream.str().c_str());
>>
>> ^
>>
>> source/lac/CMakeFiles/obj_lac.release.dir/build.make:1070: recipe for
>> target 'source/lac/CMakeFiles/obj_lac.release.dir/petsc_pr
>> econdition.cc.o' failed
>> make[2]: ***
>> [source/lac/CMakeFiles/obj_lac.release.dir/petsc_precondition.cc.o] Error 1
>> CMakeFiles/Makefile2:3283: recipe for target
>> 'source/lac/CMakeFiles/obj_lac.release.dir/all' failed
>> make[1]: *** [source/lac/CMakeFiles/obj_lac.release.dir/all] Error 2
>> Makefile:127: recipe for target 'all' failed
>> make: *** [all] Error 2
>>
>>
>>
--
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