Phil, the names for BLAS and LAPACK are changed here https://github.com/dealii/candi/blob/master/deal.II-toolchain/packages/trilinos.package#L76 Maybe you can add a cecho in the function to see if confopts is set correctly.
Best, Bruno 2017-07-06 10:56 GMT-04:00 Phil H <philip.joseph.he...@gmail.com>: > Hi Bruno, > > No, I changed the MKL to ON, which is why this is strange. > > Cheers, > > Phil > > > On Thursday, July 6, 2017 at 10:14:53 AM UTC-4, Bruno Turcksin wrote: >> >> Phil, >> >> did you forget to change MKL=OFF to MKL=ON, in candi.cfg >> (https://github.com/dealii/candi/blob/master/candi.cfg#L68)? This should >> change the name from blas to whatever is the name for mkl. >> >> Best, >> >> Bruno >> >> On Thursday, July 6, 2017 at 9:28:22 AM UTC-4, Phil H wrote: >>> >>> Hello I'm using candi to install deal.ii on a brand new cluster. >>> >>> The new cluster is geared up to use intel, but I can try and use gcc. The >>> modules I load to begin with are: >>> >>> 1) nixpkgs/.16.09 (H,S) 3) gcccore/.5.4.0 (H) 5) openmpi/2.1.1 >>> (m) >>> >>> 2) StdEnv/2016.4 (S) 4) gcc/5.4.0 (t) 6) imkl/11.3.4.258 >>> (math) >>> >>> >>> I then specify: >>> >>> >>> export CC=mpicc; export CXX=mpicxx; export FC=mpif90; export FF=mpif77 >>> >>> >>> In the candi build file, I list imkl in the relevant position: >>> >>> >>> MKL_DIR=/cvmfs/soft.computecanada.ca/easybuild/software/2017/Core/imkl/11.3.4.258/mkl/lib/intel64 >>> >>> In this folder there are: >>> >>> libmkl_ao_worker.so libmkl_intel_ilp64.so >>> >>> libmkl_avx2.so libmkl_intel_lp64.a >>> >>> libmkl_avx512_mic.so libmkl_intel_lp64.so >>> >>> libmkl_avx512.so libmkl_intel_sp2dp.a >>> >>> libmkl_avx.so libmkl_intel_sp2dp.so >>> >>> libmkl_blacs_ilp64.a libmkl_intel_thread.a >>> >>> libmkl_blacs_ilp64.so libmkl_intel_thread.so >>> >>> libmkl_blacs_intelmpi_ilp64.a libmkl_lapack95_ilp64.a >>> >>> libmkl_blacs_intelmpi_ilp64.so libmkl_lapack95_lp64.a >>> >>> libmkl_blacs_intelmpi_lp64.a libmkl_lapack.a >>> >>> libmkl_blacs_intelmpi_lp64.so libmkl_mc3.so >>> >>> libmkl_blacs_lp64.a libmkl_mc.so >>> >>> libmkl_blacs_lp64.so libmkl_pgi_thread.a >>> >>> libmkl_blacs_openmpi_ilp64.a libmkl_pgi_thread.so >>> >>> libmkl_blacs_openmpi_ilp64.so libmkl_rt.so >>> >>> libmkl_blacs_openmpi_lp64.a libmkl_scalapack.a >>> >>> libmkl_blacs_openmpi_lp64.so libmkl_scalapack_ilp64.a >>> >>> libmkl_blacs_sgimpt_ilp64.a libmkl_scalapack_ilp64.so >>> >>> libmkl_blacs_sgimpt_ilp64.so libmkl_scalapack_lp64.a >>> >>> libmkl_blacs_sgimpt_lp64.a libmkl_scalapack_lp64.so >>> >>> libmkl_blacs_sgimpt_lp64.so libmkl_sequential.a >>> >>> libmkl_blas95_ilp64.a libmkl_sequential.so >>> >>> libmkl_blas95_lp64.a libmkl.so >>> >>> libmkl_cdft.a libmkl_solver.a >>> >>> libmkl_cdft_core.a libmkl_tbb_thread.a >>> >>> libmkl_cdft_core.so libmkl_tbb_thread.so >>> >>> libmkl_core.a libmkl_vml_avx2.so >>> >>> libmkl_core.so libmkl_vml_avx512_mic.so >>> >>> libmkl_def.so libmkl_vml_avx512.so >>> >>> libmkl_em64t.a libmkl_vml_avx.so >>> >>> libmkl_gf_ilp64.a libmkl_vml_cmpt.so >>> >>> libmkl_gf_ilp64.so libmkl_vml_def.so >>> >>> libmkl_gf_lp64.a libmkl_vml_mc2.so >>> >>> libmkl_gf_lp64.so libmkl_vml_mc3.so >>> >>> libmkl_gnu_thread.a libmkl_vml_mc.so >>> >>> libmkl_gnu_thread.so locale >>> >>> libmkl_intel_ilp64.a >>> >>> >>> >>> I run into this error when compiling trilinos: >>> >>> >>> >>> Processing enabled TPL: MPI (enabled explicitly, disable with >>> -DTPL_ENABLE_MPI=OFF) >>> Processing enabled TPL: BLAS (enabled by TeuchosNumerics, disable with >>> -DTPL_ENABLE_BLAS=OFF) >>> -- Searching for libs in BLAS_LIBRARY_DIRS='' >>> -- Searching for a lib in the set "blas blas_win32": >>> -- Searching for lib 'blas' ... >>> -- Searching for lib 'blas_win32' ... >>> -- ERROR: Did not find a lib in the lib set "blas blas_win32" for the >>> TPL 'BLAS'! >>> -- ERROR: Could not find the libraries for the TPL 'BLAS'! >>> -- TIP: If the TPL 'BLAS' is on your system then you can set: >>> -DBLAS_LIBRARY_DIRS='<dir0>;<dir1>;...' >>> to point to the directories where these libraries may be found. >>> Or, just set: >>> -DTPL_BLAS_LIBRARIES='<path-to-libs0>;<path-to-libs1>;...' >>> to point to the full paths for the libraries which will >>> bypass any search for libraries and these libraries will be used >>> without >>> question in the build. (But this will result in a build-time error >>> if not all of the necessary symbols are found.) >>> -- ERROR: Failed finding all of the parts of TPL 'BLAS' (see above), >>> Aborting! >>> >>> >>> -- NOTE: The find module file for this failed TPL 'BLAS' is: >>> >>> /home/pheron/deal.ii-candi/tmp/unpack/Trilinos-trilinos-release-12-10-1/cmake/tribits/common_tpls/FindTPLBLAS.cmake >>> >>> >>> I've tried a number of different work arounds but to no luck. Some advice >>> from the cluster support is as such: "your build software apparently assumes >>> (incorrectly) that all BLAS library implementations contain the word "blas" >>> in the library name. There is no "blas_win" library on the server and the >>> BLAS you probably want to be using is that from the MKL". >>> >>> Has anyone encountered this error before, especially when using new >>> module of gcc, openmpi, and mkl? >>> >>> Thanks in advance, >>> >>> Phil > > -- > The deal.II project is located at http://www.dealii.org/ > For mailing list/forum options, see > https://groups.google.com/d/forum/dealii?hl=en > --- > You received this message because you are subscribed to a topic in the > Google Groups "deal.II User Group" group. > To unsubscribe from this topic, visit > https://groups.google.com/d/topic/dealii/fOiWdTJVyrA/unsubscribe. > To unsubscribe from this group and all its topics, send an email to > dealii+unsubscr...@googlegroups.com. > For more options, visit https://groups.google.com/d/optout. -- The deal.II project is located at http://www.dealii.org/ For mailing list/forum options, see https://groups.google.com/d/forum/dealii?hl=en --- You received this message because you are subscribed to the Google Groups "deal.II User Group" group. 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