Hi all,
I was trying to install deal.ii with MPI on cluster, but I met error.
*-- Include
/home/jk12/Programs/dealii-8.5.0/cmake/configure/configure_hdf5.cmake*
*-- Found HDF5_INCLUDE_DIR*
*-- Found HDF5_LIBRARY*
*-- Found HDF5_HL_LIBRARY*
*-- Found HDF5_PUBCONF*
*-- HDF5_LIBRARIES:
/usr/lib64/libhdf5_hl.so;/usr/lib64/libhdf5.so;/usr/local/mpi/mvapich2/2.2/intel/17.0/lib/libmpi.so*
*-- HDF5_INCLUDE_DIRS: /usr/include*
*-- HDF5_USER_INCLUDE_DIRS: /usr/include*
*-- Found HDF5*
*-- Insufficient hdf5 installation found: hdf5 has to be configured with
the same MPI configuration as deal.II.*
*-- DEAL_II_WITH_HDF5 has unmet external dependencies.*
*CMake Error at cmake/macros/macro_configure_feature.cmake:112 (MESSAGE):*
* Could not find the hdf5 library!*
* Insufficient hdf5 installation found!*
* hdf5 has to be configured with the same MPI configuration as deal.II,
but*
* found:*
* DEAL_II_WITH_MPI = ON*
* HDF5_WITH_MPI = FALSE*
* Please ensure that a suitable hdf5 library is installed on your
computer.*
* If the library is not at a default location, either provide some hints
for*
* autodetection,*
* $ HDF5_DIR="..." cmake <...>*
* $ cmake -DHDF5_DIR="..." <...>*
* or set the relevant variables by hand in ccmake.*
*Call Stack (most recent call first):*
* cmake/macros/macro_configure_feature.cmake:268 (FEATURE_ERROR_MESSAGE)*
* cmake/configure/configure_hdf5.cmake:48 (CONFIGURE_FEATURE)*
* cmake/macros/macro_verbose_include.cmake:19 (INCLUDE)*
* CMakeLists.txt:124 (VERBOSE_INCLUDE)*
*-- Configuring incomplete, errors occurred!*
while I am using following modules on my home..
* 1) torque/6.0.2 4) openmpi/1.4-gcc 7) git/1.7
10) valgrind/3.10.1*
* 2) moab/9.0.2 5) gcc/4.9.2 8)
intel/17.0 11) petsc/3.7.5*
* 3) env/taub 6) cmake/3.6.2 9)
mvapich2/2.2-intel-17.0 12) h5utils/1.1**2*
I do have hdf5 in h5utils.......
so I had configured before as ...
*cmake -DCMAKE_INSTALL_PREFIX=~/Programs/dealii
-DHDF5_DIR="/usr/local/h5utils-1.12/"*
what might be the problem ?
Thank you
--
The deal.II project is located at http://www.dealii.org/
For mailing list/forum options, see
https://groups.google.com/d/forum/dealii?hl=en
---
You received this message because you are subscribed to the Google Groups
"deal.II User Group" group.
To unsubscribe from this group and stop receiving emails from it, send an email
to dealii+unsubscr...@googlegroups.com.
For more options, visit https://groups.google.com/d/optout.
