Hi Artur, Thank you very much for your sharing! it is very helpful. I basically followed your installation, and it works well for trilinos and petsc. However when I install deal.ii with link to petsc, error happens when compiling data_out_dof_data.cc that "error: no suitable conversion function from “PetscScalar” to “double” exists". Well I may open a new email for this question.:) Thank you for all your help.
Zhenlin 2017-04-06 14:34 GMT-04:00 Artur Safin <asa...@gmail.com>: > Zhenlin, > > Before installation, I had loaded modules intel/15.0.2 and cxx11, and was > using mvapich2/2.1. > > For Trilinos, here is the cmake command: > > cmake \ > -D Trilinos_ENABLE_CXX11=ON \ > -D Trilinos_ENABLE_Sacado=ON \ > -D Trilinos_ENABLE_MueLu:BOOL=ON \ > -D Trilinos_ENABLE_Stratimikos=ON \ > -D CMAKE_BUILD_TYPE=RELEASE \ > -D CMAKE_CXX_FLAGS="-mkl -std=c++11 -O3" \ > -D CMAKE_C_FLAGS="-mkl -O3" \ > -D CMAKE_FORTRAN_FLAGS="-03" \ > -D Trilinos_EXTRA_LINK_FLAGS="-lgfortran" \ > -D CMAKE_VERBOSE_MAKEFILE=FALSE \ > -D Trilinos_VERBOSE_CONFIGURE=FALSE \ > -D TPL_ENABLE_MPI=ON \ > -D BUILD_SHARED_LIBS=ON \ > -D CMAKE_C_COMPILER=`which mpicc` \ > -D CMAKE_CXX_COMPILER=`which mpicxx` \ > -D CMAKE_Fortran_COMPILER=`which mpif90` \ > -D MPI_EXEC=`which mpiexec` \ > -D > BLAS_LIBRARY_DIRS:PATH="/opt/apps/intel/15/composer_xe_2015.2.164/mkl/lib/intel64" > \ > -D BLAS_LIBRARY_NAMES:STRING="mkl_intel_lp64; mkl_intel_thread; > mkl_core;" \ > -D > LAPACK_LIBRARY_DIRS:PATH="/opt/apps/intel/15/composer_xe_2015.2.164/mkl/lib/intel64" > \ > -D LAPACK_LIBRARY_NAMES:STRING="mkl_intel_lp64; mkl_intel_thread; > mkl_core;" \ > -D CMAKE_INSTALL_PREFIX:PATH=<Installation Path> > > You need MueLu, but I cannot remember if the other two libraries were > necessary. > > Configuring PETSc was fairly straightforward. Here's a version with some > optimization: > > ./configure \ > --with-scalar-type=complex \ > --with-mpi=1 \ > --with-clanguage=c++ \ > --with-cc=mpicc \ > --with-fc=gfortran \ > --with-cxx=mpic++ \ > --with-fc=mpif90 \ > --download-mumps \ > --download-scalapack \ > --with-fortran-kernels=1 \ > --with-debugging=0 COPTFLAGS='-O3 -march=native -mtune=native' > CXXOPTFLAGS='-O3 -march=native -mtune=native' FOPTFLAGS='-O3 -march=native > -mtune=native' \ > --download-fblaslapack=1 \ > > I did not link deal.2 to PETSc though - not sure what is going to happen > if you do. > > cmake \ > -D CMAKE_INSTALL_PREFIX=<Installation Path> \ > -D DEAL_II_WITH_MPI=ON \ > -D CMAKE_C_COMPILER=`which mpicc` \ > -D CMAKE_CXX_COMPILER=`which mpicxx` \ > -D CMAKE_Fortran_COMPILER=`which mpif90` \ > -D DEAL_II_WITH_TRILINOS=ON \ > -D DEAL_II_WITH_PETSC=OFF \ > -D DEAL_II_WITH_P4EST=ON \ > -D DEAL_II_WITH_METIS=ON \ > -D METIS_DIR=/opt/apps/intel15/metis/5.0.2 \ > -D P4EST_DIR=/opt/apps/intel15/mvapich2_2_1/p4est/1.1 \ > -D TRILINOS_DIR=<Trilinos Path> \ > -D DEAL_II_COMPONENT_DOCUMENTATION=OFF \ > -D DEAL_II_COMPONENT_EXAMPLES=OFF \ > -D DEAL_II_COMPONENT_MESH_CONVERTER=OFF \ > .. > > Best, > > Artur > > -- > The deal.II project is located at http://www.dealii.org/ > For mailing list/forum options, see https://groups.google.com/d/ > forum/dealii?hl=en > --- > You received this message because you are subscribed to a topic in the > Google Groups "deal.II User Group" group. > To unsubscribe from this topic, visit https://groups.google.com/d/ > topic/dealii/VBskksRBFLw/unsubscribe. > To unsubscribe from this group and all its topics, send an email to > dealii+unsubscr...@googlegroups.com. > For more options, visit https://groups.google.com/d/optout. > -- The deal.II project is located at http://www.dealii.org/ For mailing list/forum options, see https://groups.google.com/d/forum/dealii?hl=en --- You received this message because you are subscribed to the Google Groups "deal.II User Group" group. To unsubscribe from this group and stop receiving emails from it, send an email to dealii+unsubscr...@googlegroups.com. For more options, visit https://groups.google.com/d/optout.
