Dear All,

I'm trying to calculate something differently depending on material id.

So, I have to set material id before next iteration.(I'm going to use 
picard iteration)

The way I have done is 

1.the middle point of mesh would be selected. (it is indicated as max_cell 
in my code)
2.the neighbor cells of max_cell are accessed and the neighbor cells of 
those neighbor cells would be also accessed later.
3.If neighbor cell satisfy the certain condition and have never been 
accessed before I will set the new material id on these cells.
 (The condition is "fabs(solution)>=fabs(psi_b) " and the new material id 
would be same as iteration number to check whether it has been accessed 
before) 
4.those cells that satisfy the condition, would also have access to the 
neighbor cells.(those neighbor cells are indicated as next_cell in my code)
5.the process would continue until there is no neighbor cells anymore that 
satisfy fabs(solution)>=fabs(psi_b)

i.e. What I'm going to do is to set the new material id in the inside of 
contour of psi_b.

So, my code is as follows.

template <int dim>
void Step6<dim>::set_id ()
{
  const QGauss<dim> quadrature_formula(2);
  FEValues<dim> fe_values (fe, quadrature_formula,
                           update_values    |  update_quadrature_points);

  const unsigned int   n_q_points    = quadrature_formula.size();
  std::vector<typename DoFHandler<dim>::cell_iterator>  next_cell;
  std::vector<typename DoFHandler<dim>::cell_iterator> neigh_cell;
  typename DoFHandler<dim>::cell_iterator neigh_cell_tmp;
  std::vector<double>   sol_tmp(n_q_points);

  std::cout<<"to check out the position of max cell"<<std::endl;
  fe_values.reinit(max_cell);
  const Point<dim> &p=fe_values.quadrature_point(0);
  std::cout<<"R_max="<<p(0)<<"Z_max="<<p(1)<<std::endl;
  std::cout<<"mat_id="<<int(max_cell->material_id())<<std::endl;

  max_cell->set_material_id(iter);                         //set new 
material id as iteration number
  for(unsigned int face_no=0;face_no< 
GeometryInfo<dim>::faces_per_cell;++face_no) //starting from the neighbor 
cells of max_cell
        next_cell.push_back(max_cell->neighbor(face_no));

  while(next_cell.size()!=0)  //until there is no neighbor cells that 
satisfy the condition anymore.
  {
     neigh_cell.clear();

     neigh_cell.resize(next_cell.size());
     std::copy(next_cell.begin(), next_cell.end(),neigh_cell.begin());
     next_cell.clear();
     for(unsigned int i=0; i<neigh_cell.size(); ++i)
     {
        fe_values.reinit(neigh_cell[i]);
        fe_values.get_function_values(solution,sol_tmp);
        unsigned int determine=0;                        //to determine 
that whether all quad points are not satisfied with the condition. 
        for(unsigned int q=0; q < n_q_points; q++)
        {
          if(std::fabs(sol_tmp[q])>=std::fabs(psi_b))
          {
            neigh_cell[i]->set_material_id(iter);
            for(unsigned int face_no=0;face_no< 
GeometryInfo<dim>::faces_per_cell;++face_no)
            {
                neigh_cell_tmp=(neigh_cell[i]->neighbor(face_no));
                if(int(neigh_cell_tmp->material_id())!=iter) //To exclude 
the already checked cell
                {
                   next_cell.push_back(neigh_cell_tmp);  
                }
            }
            break;
          }
          determine++;
        }
        if(determine==n_q_points) //if all points on the cell are not 
satisfied with the condition, set material id as zero
        {
          neigh_cell[i]->set_material_id(0);   //vacuum
        }
     }
    std::cout<<"#next_cell="<<next_cell.size()<<std::endl;
  }
}


the above code works. However, the problem is when I check the number of 
next_cell, it is much larger than the number of active cells.

The number of active cells is 9390 but the number of active cell is from 11 
to 16359020 that is much larger than 9390.

I guess that  "if(int(neigh_cell_tmp->material_id())!=iter) //To exclude 
the already checked cell" this part in the above code is not working 
properly. So, the duplication of access happens.

Could you let me know what the problem is in the above code...?

Thank you.

Kyusik.

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