Is there something different about the way that "setup" runs since Christmas?

I have a local mirror of the cygwin packages (neatened up using Michael Chase's 
clean_setup perl script) which I access across the local network.  I always call setup 
with the "-5" option (no md5 checks).

All was working fine last year, now setup bogs down my machine (excessive processor 
usage by the "system" process) after parsing the setup.ini file.  My first impression 
is that setup is doing the md5 checks without telling me that it is, but I can't be 
sure.  My main confusion stems from the fact that there hasn't been any changes in the 
setup program since last October(ish) - I'm using version 2.416.

If anyone could please give me some hints, that would be fantastic.

Thanks,
Mark.

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