I've just completed the installation of Cygwin 1.5.24 to my Windows Server 2003 
64-bit machine.
 
I installed using my domain user account (dougruff), and when the installation 
completed, I was able to launch a bash shell in my login session without any 
problems.
 
But as soon as another user logs into this system and starts Cygwin bash, they 
are greeted with an uninitialized Bash shell (no path is set, no prompt is set, 
etc.)
 
There is no HOME variable set in Windows.  Nor is there an entry in /etc/passwd 
for my account (dougruff).
 
One thing that I notice (which you'll see below) is that the output from 
/bin/id displays a number of GID's that are > 65536.
 
I've checked the archives for previous instances of this problem but don't seem 
to find a solution.
 
What could be keeping other users from being able to get a properly initialized 
shell session on this machine?
 
Here's my cygcheck -svr output:
Cygwin Configuration Diagnostics
Current System Time: Sun Aug 30 23:55:34 2009
Windows 2003 Enterprise Server Ver 5.2 Build 3790 Service Pack 2
Running under WOW64 on AMD64
Running in Terminal Service session
Path: D:\cygwin\usr\local\bin
 D:\cygwin\bin
 D:\cygwin\bin
 D:\cygwin\usr\X11R6\bin
 c:\WINDOWS\SysWOW64
 c:\Program Files\Legato\nsr\bin
 d:\Perl\bin\
 c:\WINDOWS\system32
 c:\WINDOWS
 c:\WINDOWS\System32\Wbem
 c:\Program Files (x86)\Dell\SysMgt\RAC5
 c:\Program Files (x86)\Dell\SysMgt\oma\bin
 c:\Program Files (x86)\Windows Imaging\
 d:\jre1.6.0_02\bin
 d:\perl\bin
 d:\Program Files (x86)\Oracle\instantclient_10_2
 d:\jre1.6.0_02\bin
 d:\perl\bin
 d:\Program Files (x86)\Oracle\instantclient_10_2
Output from D:\cygwin\bin\id.exe (nontsec)
UID: 400(dougruff)             GID: 401(mkpasswd)
0(root)                           827296(Local_Support_Group)
837296(Local_Support_Group) 401(mkpasswd)
Output from D:\cygwin\bin\id.exe (ntsec)
UID: 400(dougruff)             GID: 401(mkpasswd)
0(root)                           827296(Local_Support_Group)
837296(Local_Support_Group) 401(mkpasswd)
SysDir: C:\WINDOWS\system32
WinDir: C:\WINDOWS
USER = 'dougruff'
PWD = '/cygdrive/d/tmp'
HOME = '/cygdrive/c/Documents and Settings/dougruff'
MAKE_MODE = 'unix'
HOMEPATH = '\Documents and Settings\dougruff'
MANPATH = '/usr/local/man:/usr/share/man:/usr/man:'
DSETPATH = 'C:\Program Files\Dell\DSET'
APPDATA = 'C:\Documents and Settings\dougruff\Application Data'
PROGRAMW6432 = 'C:\Program Files'
HOSTNAME = '2k3-server-001'
TERM = 'cygwin'
PROCESSOR_IDENTIFIER = 'EM64T Family 6 Model 29 Stepping 1, GenuineIntel'
WINDIR = 'C:\WINDOWS'
COMMONPROGRAMW6432 = 'C:\Program Files\Common Files'
OLDPWD = '/cygdrive/c/Documents and Settings/dougruff'
USERDOMAIN = 'LOCALDOMAIN'
COMMONPROGRAMFILES(X86) = 'C:\Program Files (x86)\Common Files'
UATDATA = 'C:\WINDOWS\SysWOW64\CCM\UATData\D9F8C395-CAB8-491d-B8AC-179A1FE1BE77'
OS = 'Windows_NT'
ALLUSERSPROFILE = 'C:\Documents and Settings\All Users'
JRE_HOME = 'D:\jre1.6.0_02'
TEMP = '/cygdrive/c/DOCUME~1/DOUGRU~1/LOCALS~1/Temp/1'
COMMONPROGRAMFILES = 'C:\Program Files (x86)\Common Files'
TOMCAT_DIR = 'apache-tomcat-6.0.14'
JRE_HOME_32 = 'D:\jre1.6.0-x86'
USERNAME = 'dougruff'
CLUSTERLOG = 'C:\WINDOWS\Cluster\cluster.log'
PROCESSOR_LEVEL = '6'
TNS_ADMIN = 'D:\Program Files (x86)\Oracle\network\admin'
FP_NO_HOST_CHECK = 'NO'
SYSTEMDRIVE = 'C:'
PROCESSOR_ARCHITEW6432 = 'AMD64'
USERPROFILE = 'C:\Documents and Settings\dougruff'
CLIENTNAME = 'WINDOWSXP'
PS1 = '\[\e]0;\w\a\]\n\[\e[32m\...@\h \[\e[33m\]\w\[\e[0m\]\n\$ '
LOGONSERVER = '\\DOMAINDC01'
PROCESSOR_ARCHITECTURE = 'x86'
!C: = 'C:\Documents and Settings\dougruff'
SHLVL = '1'
USERDNSDOMAIN = 'DOUG.RUFF.COM'
PATHEXT = '.COM;.EXE;..BAT;.CMD;.VBS;.VBE;.JS;.JSE;.WSF;.WSH'
HOMEDRIVE = 'C:'
!D: = 'D:\cygwin\bin'
PROMPT = '$P$G'
COMSPEC = 'C:\WINDOWS\system32\cmd.exe'
BASH_ENV = 'D:\appldir01\etc\.bashrc'
TMP = '/cygdrive/c/DOCUME~1/DOUGRU~1/LOCALS~1/Temp/1'
SYSTEMROOT = 'C:\WINDOWS'
PRINTER = 'HP LaserJet'
CVS_RSH = '/bin/ssh'
PROCESSOR_REVISION = '1d01'
INFOPATH = '/usr/local/info:/usr/share/info:/usr/info:'
PROGRAMFILES = 'C:\Program Files (x86)'
NUMBER_OF_PROCESSORS = '16'
PROGRAMFILES(X86) = 'C:\Program Files (x86)'
SESSIONNAME = 'RDP-Tcp#1'
COMPUTERNAME = '2k3-server-001'
_ = '/usr/bin/cygcheck'
POSIXLY_CORRECT = '1'
HKEY_CURRENT_USER\Software\Cygnus Solutions
HKEY_CURRENT_USER\Software\Cygnus Solutions\Cygwin
HKEY_CURRENT_USER\Software\Cygnus Solutions\Cygwin\mounts v2
  (default) = '/cygdrive'
  cygdrive flags = 0x00000022
HKEY_CURRENT_USER\Software\Cygnus Solutions\Cygwin\Program Options
HKEY_LOCAL_MACHINE\SOFTWARE\Cygnus Solutions
HKEY_LOCAL_MACHINE\SOFTWARE\Cygnus Solutions\Cygwin
HKEY_LOCAL_MACHINE\SOFTWARE\Cygnus Solutions\Cygwin\mounts v2
HKEY_LOCAL_MACHINE\SOFTWARE\Cygnus Solutions\Cygwin\mounts v2\/
  (default) = 'D:\cygwin'
  flags = 0x0000000a
HKEY_LOCAL_MACHINE\SOFTWARE\Cygnus Solutions\Cygwin\mounts v2\/usr/bin
  (default) = 'D:\cygwin\bin'
  flags = 0x0000000a
HKEY_LOCAL_MACHINE\SOFTWARE\Cygnus Solutions\Cygwin\mounts v2\/usr/lib
  (default) = 'D:\cygwin\lib'
  flags = 0x0000000a
HKEY_LOCAL_MACHINE\SOFTWARE\Cygnus Solutions\Cygwin\Program Options
c:  hd  NTFS    139389Mb   6% CP CS UN PA FC     
d:  hd  NTFS    139384Mb   6% CP CS UN PA FC     
e:  hd  NTFS    139384Mb   1% CP CS UN PA FC     
f:  hd  NTFS    139384Mb   1% CP CS UN PA FC     
g:  cd             N/A    N/A                    
.              /cygdrive  user    binmode,cygdrive
D:\cygwin      /          system  binmode
D:\cygwin\bin  /usr/bin   system  binmode
D:\cygwin\lib  /usr/lib   system  binmode
Found: D:\cygwin\bin\awk.exe
Found: D:\cygwin\bin\bash.exe
Found: D:\cygwin\bin\cat.exe
Found: D:\cygwin\bin\cp.exe
Not Found: cpp (good!)
Not Found: crontab
Found: D:\cygwin\bin\find.exe
Found: c:\WINDOWS\SysWOW64\find.exe
Warning: D:\cygwin\bin\find.exe hides c:\WINDOWS\SysWOW64\find.exe
Not Found: gcc
Not Found: gdb
Found: D:\cygwin\bin\grep.exe
Found: D:\cygwin\bin\kill.exe
Found: d:\appldir01\bin\kill.exe
Warning: D:\cygwin\bin\kill.exe hides d:\appldir01\bin\kill.exe
Not Found: ld
Found: D:\cygwin\bin\ls.exe
Not Found: make
Found: D:\cygwin\bin\mv.exe
Not Found: patch
Found: D:\cygwin\bin\perl.exe
Found: d:\Perl\bin\perl.exe
Warning: D:\cygwin\bin\perl.exe hides d:\Perl\bin\perl.exe
Found: D:\cygwin\bin\rm.exe
Found: D:\cygwin\bin\sed.exe
Not Found: ssh
Found: D:\cygwin\bin\sh.exe
Found: D:\cygwin\bin\tar.exe
Found: D:\cygwin\bin\test.exe
Not Found: vi
Not Found: vim
   61k 2006/11/10 D:\cygwin\bin\cygbz2-1.dll - os=4.0 img=1.0 sys=4.0
                  "cygbz2-1.dll" v0.0 ts=2006/11/10 23:42
    7k 2003/10/19 D:\cygwin\bin\cygcrypt-0.dll - os=4.0 img=1.0 sys=4.0
                  "cygcrypt-0.dll" v0.0 ts=2003/10/19 7:57
  895k 2004/04/28 D:\cygwin\bin\cygdb-4.2.dll - os=4.0 img=1.0 sys=4.0
                  "cygdb-4.2.dll" v0.0 ts=2004/4/27 15:31
  965k 2005/05/14 D:\cygwin\bin\cygdb-4.3.dll - os=4.0 img=1.0 sys=4.0
                  "cygdb-4.3.dll" v0.0 ts=2005/5/14 12:37
 1156k 2004/04/28 D:\cygwin\bin\cygdb_cxx-4.2.dll - os=4.0 img=1.0 sys=4.0
                  "cygdb_cxx-4.2.dll" v0.0 ts=2004/4/27 15:35
 1240k 2005/05/14 D:\cygwin\bin\cygdb_cxx-4.3.dll - os=4.0 img=1.0 sys=4.0
                  "cygdb_cxx-4.3.dll" v0.0 ts=2005/5/14 12:41
  118k 2007/04/06 D:\cygwin\bin\cygexpat-0.dll - os=4.0 img=1.0 sys=4.0
                  "cygexpat-0.dll" v0.0 ts=2007/4/6 20:43
   40k 2006/11/15 D:\cygwin\bin\cygform-8.dll - os=4.0 img=1.0 sys=4.0
                  "cygform-8.dll" v0.0 ts=2006/11/15 7:06
   19k 2006/11/19 D:\cygwin\bin\cyggdbm-4.dll - os=4.0 img=1.0 sys=4.0
                  "cyggdbm-4.dll" v0.0 ts=2006/11/19 8:18
    8k 2006/11/19 D:\cygwin\bin\cyggdbm_compat-4.dll - os=4.0 img=1.0 sys=4.0
                  "cyggdbm_compat-4.dll" v0.0 ts=2006/11/19 8:18
   25k 2007/05/02 D:\cygwin\bin\cyghistory6.dll - os=4.0 img=1.0 sys=4.0
                  "cyghistory6.dll" v0.0 ts=2007/5/2 1:01
  976k 2006/10/22 D:\cygwin\bin\cygiconv-2.dll - os=4.0 img=1.0 sys=4.0
                  "cygiconv-2.dll" v0.0 ts=2006/10/22 23:44
   37k 2003/08/10 D:\cygwin\bin\cygintl-2.dll - os=4.0 img=1.0 sys=4.0
                  "cygintl-2.dll" v0.0 ts=2003/8/10 21:50
   31k 2005/11/20 D:\cygwin\bin\cygintl-3.dll - os=4.0 img=1.0 sys=4.0
                  "cygintl-3.dll" v0.0 ts=2005/11/20 2:04
   31k 2006/10/23 D:\cygwin\bin\cygintl-8.dll - os=4.0 img=1.0 sys=4.0
                  "cygintl-8.dll" v0.0 ts=2006/10/23 0:12
   21k 2006/11/15 D:\cygwin\bin\cygmenu-8.dll - os=4.0 img=1.0 sys=4.0
                  "cygmenu-8.dll" v0.0 ts=2006/11/15 7:05
   67k 2006/11/15 D:\cygwin\bin\cygncurses++-8.dll - os=4.0 img=1.0 sys=4.0
                  "cygncurses++-8.dll" v0.0 ts=2006/11/15 7:13
  237k 2006/11/15 D:\cygwin\bin\cygncurses-8.dll - os=4.0 img=1.0 sys=4.0
                  "cygncurses-8.dll" v0.0 ts=2006/11/15 7:02
   12k 2006/11/15 D:\cygwin\bin\cygpanel-8.dll - os=4.0 img=1.0 sys=4.0
                  "cygpanel-8.dll" v0.0 ts=2006/11/15 7:04
  133k 2007/06/27 D:\cygwin\bin\cygpcre-0.dll - os=4.0 img=1.0 sys=4.0
                  "cygpcre-0.dll" v0.0 ts=2007/6/27 3:49
  303k 2007/06/27 D:\cygwin\bin\cygpcrecpp-0.dll - os=4.0 img=1.0 sys=4.0
                  "cygpcrecpp-0.dll" v0.0 ts=2007/6/27 3:50
    7k 2007/06/27 D:\cygwin\bin\cygpcreposix-0.dll - os=4.0 img=1.0 sys=4.0
                  "cygpcreposix-0.dll" v0.0 ts=2007/6/27 3:50
 1224k 2007/07/19 D:\cygwin\bin\cygperl5_8.dll - os=4.0 img=1.0 sys=4.0
                  "cygperl5_8.dll" v0.0 ts=2007/7/8 19:14
   22k 2002/06/09 D:\cygwin\bin\cygpopt-0.dll - os=4.0 img=1.0 sys=4.0
                  "cygpopt-0.dll" v0.0 ts=2002/6/9 5:45
  154k 2007/05/02 D:\cygwin\bin\cygreadline6.dll - os=4.0 img=1.0 sys=4.0
                  "cygreadline6.dll" v0.0 ts=2007/5/2 1:01
 1830k 2007/01/31 D:\cygwin\bin\cygwin1.dll - os=4.0 img=1.0 sys=4.0
                  "cygwin1.dll" v0.0 ts=2007/1/31 9:58
    Cygwin DLL version info:
        DLL version: 1.5.24
        DLL epoch: 19
        DLL bad signal mask: 19005
        DLL old termios: 5
        DLL malloc env: 28
        API major: 0
        API minor: 156
        Shared data: 4
        DLL identifier: cygwin1
        Mount registry: 2
        Cygnus registry name: Cygnus Solutions
        Cygwin registry name: Cygwin
        Program options name: Program Options
        Cygwin mount registry name: mounts v2
        Cygdrive flags: cygdrive flags
        Cygdrive prefix: cygdrive prefix
        Cygdrive default prefix: 
        Build date: Wed Jan 31 10:57:51 CET 2007
        CVS tag: cr-0x5f1
        Shared id: cygwin1S4
Can't find the cygrunsrv utility, skipping services check.
Cygwin Package Information
Last downloaded files to: D:\Program Files (x86)\appldir01\Installer\cygwin
Last downloaded files from: D:\Program Files (x86)\appldir01\Installer\cygwin
Package              Version
_update-info-dir     00536-1
alternatives         1.3.29a-1
ash                  20040127-3
base-files           3.7-1
base-passwd          2.2-1
bash                 3.2.17-15
bzip2                1.0.3-2
coreutils            6.9-4
crypt                1.1-1
cygutils             1.3.1-1
cygwin               1.5.24-2
cygwin-doc           1.4-4
diffutils            2.8.7-1
editrights           1.01-1
expat                1.95.8-2
findutils            4.3.8-1
gawk                 3.1.5-4
grep                 2.5.1a-4
groff                1.18.1-2
gzip                 1.3.12-2
less                 382-1
libbz2_1             1.0.3-2
libdb4.2             4.2.52-1
libdb4.3             4.3.28-1
libexpat0            1.95.8-2
libgdbm4             1.8.3-8
libiconv2            1.11-1
libintl2             0.12.1-3
libintl3             0.14.5-1
libintl8             0.15-1
libncurses8          5.5-3
libpcre0             7.2-1
libpopt0             1.6.4-4
libreadline6         5.2.4-8
login                1.9-7
man                  1.6e-1
mktemp               1.5-4
perl                 5.8.8-4
rebase               2.4.3-1
run                  1.1..10-1
sed                  4.1.5-2
tar                  1.18-1
termcap              20050421-1
terminfo             5.5_20061104-1
texinfo              4.8a-1
which                1.7-1
Use -h to see help about each section





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