Yes I did and I have plenty. I have plenty of disk space and inodes on the
machine
On Wed, Aug 17, 2022 at 12:00 PM ✓ Paul Courbis de Bridiers de Villemor <
p...@courbis.fr> wrote:
> Hi Did you check if you had enough free inodes on the partition ? df -i
> Regarfs Le mer. 17 août 2022 à 18: 56, Rodolfo Aramayo via GNU coreutils
> General Discussion <coreutils@ gnu. org> a écrit : Dear Coreutils
> Maintainers,
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> Hi
>
> Did you check if you had enough free inodes on the partition ?
> df -i
>
> Regarfs
>
> Le mer. 17 août 2022 à 18:56, Rodolfo Aramayo via GNU coreutils General
> Discussion <coreutils@gnu.org> a écrit :
>
>> Dear Coreutils Maintainers,
>>
>> First, thank you for your work. I use coreutils daily both for my research
>> and teaching. It is a great set of tools.
>>
>> Second, I have recently run into an "No space left on device" error when
>> attempting to csplit a 200GB xml file.
>>
>> The command I am using is:
>>
>> csplit --quiet --elide-empty-files --digits=12 --prefix=zz_
>> 00_founder_file
>> /"<entry id="/ {*};
>>
>> I should say that this command works like a charm with 2GB and with 20GB
>> test files, but when scaled to the target file (200GB), csplit reports the
>> error and stops there, despite the fact that I have plenty of disk space
>> and memory available on the machine.
>>
>> I should also say that I am running this process on an Ubuntu machine
>> (default ulimit parameters):
>>
>> Linux digitalbiology01 5.15.0-46-generic #49~20.04.1-Ubuntu SMP Thu Aug 4
>> 19:15:44 UTC 2022 x86_64 x86_64 x86_64 GNU/Linux
>>
>> I am using: csplit (GNU coreutils) 8.30
>>
>> Any advice/comments on how to proceed will be gratefully appreciated
>>
>> Rodolfo
>>
>> --
>> Dr. Rodolfo Aramayo, PhD
>> Faculty of Biology and Genetics
>> Department of Biology, Texas A&M University
>> PeerJ
>> PeerJ - the Journal of Life & Environmental Sciences
>> <https://peerj.com/
>> <https://urldefense.com/v3/__https://peerj.com/__;!!KwNVnqRv!ArufV4UYUW0G6m8fx8_OW4QHK_XhstRVdUC9C7dKNBBXQHLOqrjSoF8-GZ5T4tE0GzKTkSq4UOEtPOg$>>
>> Academic
>> Editor peerj.com/RodolfoAramayo
>> <https://urldefense.com/v3/__http://peerj.com/RodolfoAramayo__;!!KwNVnqRv!ArufV4UYUW0G6m8fx8_OW4QHK_XhstRVdUC9C7dKNBBXQHLOqrjSoF8-GZ5T4tE0GzKTkSq4SQpa-O8$>
>>
> --
> --
> Paul Courbis de Bridiers de Villemor
>
--
Dr. Rodolfo Aramayo, PhD
Faculty of Biology and Genetics
Department of Biology, Texas A&M University
PeerJ
PeerJ - the Journal of Life & Environmental Sciences
<https://peerj.com/> Academic
Editor peerj.com/RodolfoAramayo
