Changeset: c9cd76227bde for MonetDB
URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=c9cd76227bde
Added Files:
sql/backends/monet5/Tests/pyapi18.sql
sql/backends/monet5/Tests/pyapi18.stable.err
sql/backends/monet5/Tests/pyapi18.stable.out
sql/backends/monet5/Tests/pyapi19.sql
sql/backends/monet5/Tests/pyapi19.stable.err
sql/backends/monet5/Tests/pyapi19.stable.out
Modified Files:
monetdb5/extras/pyapi/pyapi.c
Branch: pyapi
Log Message:
Throw error when user tries to store input argument in _values dictionary.
diffs (truncated from 346 to 300 lines):
diff --git a/monetdb5/extras/pyapi/pyapi.c b/monetdb5/extras/pyapi/pyapi.c
--- a/monetdb5/extras/pyapi/pyapi.c
+++ b/monetdb5/extras/pyapi/pyapi.c
@@ -868,6 +868,21 @@ str PyAPIeval(Client cntxt, MalBlkPtr mb
// The function has been successfully created/compiled, all that
remains is to actually call the function
pResult = PyObject_CallObject(pFunc, pArgs);
+ {
+ //check the _values dictionary to see if any of the stored values
are input values
+ PyObject *key, *value;
+ Py_ssize_t pos = 0;
+ while (PyDict_Next(pDict, &pos, &key, &value)) {
+ for(i = 0; i < pci->argc - (pci->retc + 2); i ++) {
+ PyObject *arg = PyTuple_GetItem(pArgs, i);
+ if (arg == value) {
+ msg = createException(MAL, "pyapi.eval", "You cannot
directly store input arguments in the _values dictionary, instead use
_values[key] = numpy.copy(input).");
+ goto wrapup;
+ }
+ }
+ }
+ }
+
Py_DECREF(pFunc);
Py_DECREF(pArgs);
Py_DECREF(pColumns);
diff --git a/sql/backends/monet5/Tests/pyapi18.sql
b/sql/backends/monet5/Tests/pyapi18.sql
new file mode 100644
--- /dev/null
+++ b/sql/backends/monet5/Tests/pyapi18.sql
@@ -0,0 +1,22 @@
+START TRANSACTION;
+
+CREATE TABLE vals(i INTEGER);
+INSERT INTO vals VALUES (1), (2), (3), (4), (5), (6), (7);
+
+CREATE FUNCTION pyapi18a(i integer) returns integer
+language P
+{
+ _values['number'] = 42
+ return(i)
+};
+
+CREATE FUNCTION pyapi18b(i integer) returns integer
+language P
+{
+ return _values['number'] * i
+};
+SELECT pyapi18b(pyapi18a(i)) FROM vals;
+DROP FUNCTION pyapi18a; DROP FUNCTION pyapi18b;
+DROP TABLE vals;
+
+ROLLBACK;
diff --git a/sql/backends/monet5/Tests/pyapi18.stable.err
b/sql/backends/monet5/Tests/pyapi18.stable.err
new file mode 100644
--- /dev/null
+++ b/sql/backends/monet5/Tests/pyapi18.stable.err
@@ -0,0 +1,38 @@
+stderr of test 'pyapi18` in directory 'sql/backends/monet5` itself:
+
+
+# 11:47:23 >
+# 11:47:23 > "mserver5" "--debug=10" "--set" "gdk_nr_threads=0" "--set"
"mapi_open=true" "--set" "mapi_port=38937" "--set"
"mapi_usock=/var/tmp/mtest-3052/.s.monetdb.38937" "--set" "monet_prompt="
"--forcemito" "--set" "mal_listing=2"
"--dbpath=/home/mytherin/opt/var/MonetDB/mTests_sql_backends_monet5" "--set"
"mal_listing=0" "--set" "embedded_r=true" "--set" "embedded_py=true"
+# 11:47:23 >
+
+# builtin opt gdk_dbpath = /home/mytherin/opt/var/monetdb5/dbfarm/demo
+# builtin opt gdk_debug = 0
+# builtin opt gdk_vmtrim = no
+# builtin opt monet_prompt = >
+# builtin opt monet_daemon = no
+# builtin opt mapi_port = 50000
+# builtin opt mapi_open = false
+# builtin opt mapi_autosense = false
+# builtin opt sql_optimizer = default_pipe
+# builtin opt sql_debug = 0
+# cmdline opt gdk_nr_threads = 0
+# cmdline opt mapi_open = true
+# cmdline opt mapi_port = 38937
+# cmdline opt mapi_usock = /var/tmp/mtest-3052/.s.monetdb.38937
+# cmdline opt monet_prompt =
+# cmdline opt mal_listing = 2
+# cmdline opt gdk_dbpath =
/home/mytherin/opt/var/MonetDB/mTests_sql_backends_monet5
+# cmdline opt mal_listing = 0
+# cmdline opt embedded_r = true
+# cmdline opt embedded_py = true
+# cmdline opt gdk_debug = 536870922
+
+# 11:47:23 >
+# 11:47:23 > "mclient" "-lsql" "-ftest" "-Eutf-8" "-i" "-e"
"--host=/var/tmp/mtest-3052" "--port=38937"
+# 11:47:23 >
+
+
+# 11:47:59 >
+# 11:47:59 > "Done."
+# 11:47:59 >
+
diff --git a/sql/backends/monet5/Tests/pyapi18.stable.out
b/sql/backends/monet5/Tests/pyapi18.stable.out
new file mode 100644
--- /dev/null
+++ b/sql/backends/monet5/Tests/pyapi18.stable.out
@@ -0,0 +1,63 @@
+stdout of test 'pyapi18` in directory 'sql/backends/monet5` itself:
+
+
+# 11:47:23 >
+# 11:47:23 > "mserver5" "--debug=10" "--set" "gdk_nr_threads=0" "--set"
"mapi_open=true" "--set" "mapi_port=38937" "--set"
"mapi_usock=/var/tmp/mtest-3052/.s.monetdb.38937" "--set" "monet_prompt="
"--forcemito" "--set" "mal_listing=2"
"--dbpath=/home/mytherin/opt/var/MonetDB/mTests_sql_backends_monet5" "--set"
"mal_listing=0" "--set" "embedded_r=true" "--set" "embedded_py=true"
+# 11:47:23 >
+
+# MonetDB 5 server v11.22.0
+# This is an unreleased version
+# Serving database 'mTests_sql_backends_monet5', using 8 threads
+# Compiled for x86_64-unknown-linux-gnu/64bit with 64bit OIDs and 128bit
integers dynamically linked
+# Found 7.684 GiB available main-memory.
+# Copyright (c) 1993-July 2008 CWI.
+# Copyright (c) August 2008-2015 MonetDB B.V., all rights reserved
+# Visit http://www.monetdb.org/ for further information
+# Listening for connection requests on mapi:monetdb://mytherin-N750JV:38937/
+# Listening for UNIX domain connection requests on
mapi:monetdb:///var/tmp/mtest-3052/.s.monetdb.38937
+# Start processing logs sql/sql_logs version 52200
+# Finished processing logs sql/sql_logs
+# MonetDB/SQL module loaded
+# MonetDB/Python module loaded
+# MonetDB/R module loaded
+
+Ready.
+
+# 11:47:23 >
+# 11:47:23 > "mclient" "-lsql" "-ftest" "-Eutf-8" "-i" "-e"
"--host=/var/tmp/mtest-3052" "--port=38937"
+# 11:47:23 >
+
+#START TRANSACTION;
+#CREATE TABLE vals(i INTEGER);
+#INSERT INTO vals VALUES (1), (2), (3), (4), (5), (6), (7);
+[ 7 ]
+#CREATE FUNCTION pyapi18_a(i integer) returns integer
+#language P
+#{
+# _values['number'] = 42
+# return(i)
+#};
+#CREATE FUNCTION pyapi18_b(i integer) returns integer
+#language P
+#{
+# return _values['number'] * i
+#};
+#SELECT pyapi18_b(pyapi18_a(i)) FROM vals;
+% sys.L # table_name
+% pyapi18b_pyapi18a_i # name
+% int # type
+% 3 # length
+[ 42 ]
+[ 84 ]
+[ 126 ]
+[ 168 ]
+[ 210 ]
+[ 252 ]
+[ 294 ]
+#DROP FUNCTION pyapi18_a; DROP FUNCTION pyapi18_b;
+#DROP FUNCTION pyapi18_a; DROP FUNCTION pyapi18_b;
+
+# 11:47:23 >
+# 11:47:23 > "Done."
+# 11:47:23 >
+
diff --git a/sql/backends/monet5/Tests/pyapi19.sql
b/sql/backends/monet5/Tests/pyapi19.sql
new file mode 100644
--- /dev/null
+++ b/sql/backends/monet5/Tests/pyapi19.sql
@@ -0,0 +1,39 @@
+START TRANSACTION;
+
+CREATE TABLE vals(i INTEGER);
+INSERT INTO vals VALUES (1), (2), (3), (4), (5), (6), (7);
+
+# Directly store input in the dictionary doesn't work (because we do zero copy)
+CREATE FUNCTION pyapi19a(i integer) returns integer
+language P
+{
+ _values['array'] = i;
+ return(i * 2)
+};
+SELECT pyapi19a(i * 2) FROM vals; #so this throws an error
+ROLLBACK;
+
+START TRANSACTION;
+CREATE TABLE vals(i INTEGER);
+INSERT INTO vals VALUES (1), (2), (3), (4), (5), (6), (7);
+
+# Correct way of doing it
+CREATE FUNCTION pyapi19a(i integer) returns integer
+language P
+{
+ _values['array'] = numpy.copy(i);
+ return(i * 2)
+};
+CREATE FUNCTION pyapi19b(i integer) returns integer
+language P
+{
+ return _values['array'] * 2
+};
+
+SELECT pyapi19a(i) FROM vals; #so this throws an error
+SELECT pyapi19b(i) FROM vals;
+
+DROP FUNCTION pyapi19a; DROP FUNCTION pyapi19b;
+DROP TABLE vals;
+
+ROLLBACK;
diff --git a/sql/backends/monet5/Tests/pyapi19.stable.err
b/sql/backends/monet5/Tests/pyapi19.stable.err
new file mode 100644
--- /dev/null
+++ b/sql/backends/monet5/Tests/pyapi19.stable.err
@@ -0,0 +1,41 @@
+stderr of test 'pyapi19` in directory 'sql/backends/monet5` itself:
+
+
+# 12:13:29 >
+# 12:13:29 > "mserver5" "--debug=10" "--set" "gdk_nr_threads=0" "--set"
"mapi_open=true" "--set" "mapi_port=30774" "--set"
"mapi_usock=/var/tmp/mtest-6324/.s.monetdb.30774" "--set" "monet_prompt="
"--forcemito" "--set" "mal_listing=2"
"--dbpath=/home/mytherin/opt/var/MonetDB/mTests_sql_backends_monet5" "--set"
"mal_listing=0" "--set" "embedded_r=true" "--set" "embedded_py=true"
+# 12:13:29 >
+
+# builtin opt gdk_dbpath = /home/mytherin/opt/var/monetdb5/dbfarm/demo
+# builtin opt gdk_debug = 0
+# builtin opt gdk_vmtrim = no
+# builtin opt monet_prompt = >
+# builtin opt monet_daemon = no
+# builtin opt mapi_port = 50000
+# builtin opt mapi_open = false
+# builtin opt mapi_autosense = false
+# builtin opt sql_optimizer = default_pipe
+# builtin opt sql_debug = 0
+# cmdline opt gdk_nr_threads = 0
+# cmdline opt mapi_open = true
+# cmdline opt mapi_port = 30774
+# cmdline opt mapi_usock = /var/tmp/mtest-6324/.s.monetdb.30774
+# cmdline opt monet_prompt =
+# cmdline opt mal_listing = 2
+# cmdline opt gdk_dbpath =
/home/mytherin/opt/var/MonetDB/mTests_sql_backends_monet5
+# cmdline opt mal_listing = 0
+# cmdline opt embedded_r = true
+# cmdline opt embedded_py = true
+# cmdline opt gdk_debug = 536870922
+
+# 12:13:29 >
+# 12:13:29 > "mclient" "-lsql" "-ftest" "-Eutf-8" "-i" "-e"
"--host=/var/tmp/mtest-6324" "--port=30774"
+# 12:13:29 >
+
+MAPI = (monetdb) /var/tmp/mtest-6324/.s.monetdb.30774
+QUERY = SELECT pyapi19a(i * 2) FROM vals; #so this throws an error
+ERROR = !You cannot directly store input arguments in the _values dictionary,
instead use _values[key] = numpy.copy(input).
+
+# 12:13:29 >
+# 12:13:29 > "Done."
+# 12:13:29 >
+
diff --git a/sql/backends/monet5/Tests/pyapi19.stable.out
b/sql/backends/monet5/Tests/pyapi19.stable.out
new file mode 100644
--- /dev/null
+++ b/sql/backends/monet5/Tests/pyapi19.stable.out
@@ -0,0 +1,88 @@
+stdout of test 'pyapi19` in directory 'sql/backends/monet5` itself:
+
+
+# 12:13:29 >
+# 12:13:29 > "mserver5" "--debug=10" "--set" "gdk_nr_threads=0" "--set"
"mapi_open=true" "--set" "mapi_port=30774" "--set"
"mapi_usock=/var/tmp/mtest-6324/.s.monetdb.30774" "--set" "monet_prompt="
"--forcemito" "--set" "mal_listing=2"
"--dbpath=/home/mytherin/opt/var/MonetDB/mTests_sql_backends_monet5" "--set"
"mal_listing=0" "--set" "embedded_r=true" "--set" "embedded_py=true"
+# 12:13:29 >
+
+# MonetDB 5 server v11.22.0
+# This is an unreleased version
+# Serving database 'mTests_sql_backends_monet5', using 8 threads
+# Compiled for x86_64-unknown-linux-gnu/64bit with 64bit OIDs and 128bit
integers dynamically linked
+# Found 7.684 GiB available main-memory.
+# Copyright (c) 1993-July 2008 CWI.
+# Copyright (c) August 2008-2015 MonetDB B.V., all rights reserved
+# Visit http://www.monetdb.org/ for further information
+# Listening for connection requests on mapi:monetdb://mytherin-N750JV:30774/
+# Listening for UNIX domain connection requests on
mapi:monetdb:///var/tmp/mtest-6324/.s.monetdb.30774
+# Start processing logs sql/sql_logs version 52200
+# Finished processing logs sql/sql_logs
+# MonetDB/SQL module loaded
+# MonetDB/Python module loaded
+# MonetDB/R module loaded
+
+Ready.
+
+# 12:13:29 >
+# 12:13:29 > "mclient" "-lsql" "-ftest" "-Eutf-8" "-i" "-e"
"--host=/var/tmp/mtest-6324" "--port=30774"
+# 12:13:29 >
+
+#START TRANSACTION;
+#CREATE TABLE vals(i INTEGER);
+#INSERT INTO vals VALUES (1), (2), (3), (4), (5), (6), (7);
+[ 7 ]
+#CREATE FUNCTION pyapi19a(i integer) returns integer
+#language P
+#{
+# _values['array'] = i;
+# return(i * 2)
+#};
+#ROLLBACK;
+#START TRANSACTION;
+#CREATE TABLE vals(i INTEGER);
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