[clang] [clang][deps] Only bypass scanning VFS for the module cache (PR #88800)

[Jan Svoboda via cfe-commits]

jansvoboda11 wrote:

@aganea Rebased, added tests and a prep-patch: 
https://github.com/llvm/llvm-project/pull/102540.

https://github.com/llvm/llvm-project/pull/88800
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