XPLOR can do it or NAB from David case I believe Also rosetta stores its structures (silent.out) most as phi psi chi angles + Calpha coords I believe
Regards Gary Dr Gary S Thompson NMR Facility Manager CCPN CoI & Working Group Member Wellcome Trust Biomolecular NMR Facility School of Biosciences, Division of Natural Sciences University of Kent, Canterbury, Kent, England, CT2 7NZ ☎:01227 82 7117 ✉️: g.s.thomp...@kent.ac.uk orchid: orcid.org/0000-0001-9399-7636 On 4 Apr 2025, at 13:05, Jon Cooper <0000488a26d62010-dmarc-requ...@jiscmail.ac.uk> wrote: Hello, I thought of XPLOR but it's been a while... (attached picture). Best wishes, Jon Cooper. jon.b.coo...@protonmail.com Sent from Proton Mail Android -------- Original Message -------- On 04/04/2025 12:19, Harry Powell <0000193323b1e616-dmarc-requ...@jiscmail.ac.uk> wrote: Hi Charlie Not sure if this is at all relevant (or even right - I expect others to correct me...), but Helen Ginn’s “Vagabond” does a refinement based on torsion angles rather than atomic positions, so she might have something that does what you are after. Harry On 4 Apr 2025, at 11:27, Carter, Charlie <0001086f1a20d42f-dmarc-requ...@jiscmail.ac.uk> wrote: Does anyone know if there is a program that will take a sequence file associated with phi and psi angles and produce a 3D coordinate set in pdb format? I know this can be done in the sense that Byron Rubin’s bender did the same thing in analog fashion. Many thanks Charlie Carter ######################################################################## To unsubscribe from the CCP4BB list, click the following link: https://eur01.safelinks.protection.outlook.com/?url=https%3A%2F%2Fwww.jiscmail.ac.uk%2Fcgi-bin%2FWA-JISC.exe%3FSUBED1%3DCCP4BB%26A%3D1&data=05%7C02%7CG.S.Thompson%40kent.ac.uk%7Cbbb55b85be5a4deaea8e08dd737116ae%7C51a9fa563f32449aa7213e3f49aa5e9a%7C0%7C0%7C638793651747951558%7CUnknown%7CTWFpbGZsb3d8eyJFbXB0eU1hcGkiOnRydWUsIlYiOiIwLjAuMDAwMCIsIlAiOiJXaW4zMiIsIkFOIjoiTWFpbCIsIldUIjoyfQ%3D%3D%7C0%7C%7C%7C&sdata=gSIn5ExNXVQG7Pvtbw6tmmye5qSN%2FC%2BtO59B5IMGDqQ%3D&reserved=0 This message was issued to members of https://eur01.safelinks.protection.outlook.com/?url=http%3A%2F%2Fwww.jiscmail.ac.uk%2FCCP4BB&data=05%7C02%7CG.S.Thompson%40kent.ac.uk%7Cbbb55b85be5a4deaea8e08dd737116ae%7C51a9fa563f32449aa7213e3f49aa5e9a%7C0%7C0%7C638793651747973782%7CUnknown%7CTWFpbGZsb3d8eyJFbXB0eU1hcGkiOnRydWUsIlYiOiIwLjAuMDAwMCIsIlAiOiJXaW4zMiIsIkFOIjoiTWFpbCIsIldUIjoyfQ%3D%3D%7C0%7C%7C%7C&sdata=EbrgVioO5Zs0OEst1YUZDijCL%2BpCzRUPZluuwALeoMI%3D&reserved=0, a mailing list hosted by https://eur01.safelinks.protection.outlook.com/?url=http%3A%2F%2Fwww.jiscmail.ac.uk%2F&data=05%7C02%7CG.S.Thompson%40kent.ac.uk%7Cbbb55b85be5a4deaea8e08dd737116ae%7C51a9fa563f32449aa7213e3f49aa5e9a%7C0%7C0%7C638793651747990715%7CUnknown%7CTWFpbGZsb3d8eyJFbXB0eU1hcGkiOnRydWUsIlYiOiIwLjAuMDAwMCIsIlAiOiJXaW4zMiIsIkFOIjoiTWFpbCIsIldUIjoyfQ%3D%3D%7C0%7C%7C%7C&sdata=%2BrLhmmxPcu%2BQdDE6qxGXZUpKc8bENyYSGt9MWmdNvLs%3D&reserved=0, terms & conditions are available at https://eur01.safelinks.protection.outlook.com/?url=https%3A%2F%2Fwww.jiscmail.ac.uk%2Fpolicyandsecurity%2F&data=05%7C02%7CG.S.Thompson%40kent.ac.uk%7Cbbb55b85be5a4deaea8e08dd737116ae%7C51a9fa563f32449aa7213e3f49aa5e9a%7C0%7C0%7C638793651748006032%7CUnknown%7CTWFpbGZsb3d8eyJFbXB0eU1hcGkiOnRydWUsIlYiOiIwLjAuMDAwMCIsIlAiOiJXaW4zMiIsIkFOIjoiTWFpbCIsIldUIjoyfQ%3D%3D%7C0%7C%7C%7C&sdata=Du1%2BSrX28twItUc1E1qait4IV5RIJYeLk9LFND71aIY%3D&reserved=0 ######################################################################## To unsubscribe from the CCP4BB list, click the following link: https://eur01.safelinks.protection.outlook.com/?url=https%3A%2F%2Fwww.jiscmail.ac.uk%2Fcgi-bin%2FWA-JISC.exe%3FSUBED1%3DCCP4BB%26A%3D1&data=05%7C02%7CG.S.Thompson%40kent.ac.uk%7Cbbb55b85be5a4deaea8e08dd737116ae%7C51a9fa563f32449aa7213e3f49aa5e9a%7C0%7C0%7C638793651748020731%7CUnknown%7CTWFpbGZsb3d8eyJFbXB0eU1hcGkiOnRydWUsIlYiOiIwLjAuMDAwMCIsIlAiOiJXaW4zMiIsIkFOIjoiTWFpbCIsIldUIjoyfQ%3D%3D%7C0%7C%7C%7C&sdata=cFe%2BPo5rc7NOWeJOreU%2BHhlt0Tu%2BRiEfeY%2Fojo94K6E%3D&reserved=0 This message was issued to members of https://eur01.safelinks.protection.outlook.com/?url=http%3A%2F%2Fwww.jiscmail.ac.uk%2FCCP4BB&data=05%7C02%7CG.S.Thompson%40kent.ac.uk%7Cbbb55b85be5a4deaea8e08dd737116ae%7C51a9fa563f32449aa7213e3f49aa5e9a%7C0%7C0%7C638793651748037952%7CUnknown%7CTWFpbGZsb3d8eyJFbXB0eU1hcGkiOnRydWUsIlYiOiIwLjAuMDAwMCIsIlAiOiJXaW4zMiIsIkFOIjoiTWFpbCIsIldUIjoyfQ%3D%3D%7C0%7C%7C%7C&sdata=04LdhnhQ0au3jRFNiizL8TKQKCOcY9IGJYZzmQ98Smc%3D&reserved=0, a mailing list hosted by https://eur01.safelinks.protection.outlook.com/?url=http%3A%2F%2Fwww.jiscmail.ac.uk%2F&data=05%7C02%7CG.S.Thompson%40kent.ac.uk%7Cbbb55b85be5a4deaea8e08dd737116ae%7C51a9fa563f32449aa7213e3f49aa5e9a%7C0%7C0%7C638793651748056084%7CUnknown%7CTWFpbGZsb3d8eyJFbXB0eU1hcGkiOnRydWUsIlYiOiIwLjAuMDAwMCIsIlAiOiJXaW4zMiIsIkFOIjoiTWFpbCIsIldUIjoyfQ%3D%3D%7C0%7C%7C%7C&sdata=XPopyKtI875%2B9jwsERwtkj3NaTgY6FNwoguRxu%2BgHdo%3D&reserved=0, terms & conditions are available at https://eur01.safelinks.protection.outlook.com/?url=https%3A%2F%2Fwww.jiscmail.ac.uk%2Fpolicyandsecurity%2F&data=05%7C02%7CG.S.Thompson%40kent.ac.uk%7Cbbb55b85be5a4deaea8e08dd737116ae%7C51a9fa563f32449aa7213e3f49aa5e9a%7C0%7C0%7C638793651748074431%7CUnknown%7CTWFpbGZsb3d8eyJFbXB0eU1hcGkiOnRydWUsIlYiOiIwLjAuMDAwMCIsIlAiOiJXaW4zMiIsIkFOIjoiTWFpbCIsIldUIjoyfQ%3D%3D%7C0%7C%7C%7C&sdata=75IE3ZDrc1E9y558KOCo49PqxHhJlNSRDau8mrXQZto%3D&reserved=0 ######################################################################## To unsubscribe from the CCP4BB list, click the following link: https://eur01.safelinks.protection.outlook.com/?url=https%3A%2F%2Fwww.jiscmail.ac.uk%2Fcgi-bin%2FWA-JISC.exe%3FSUBED1%3DCCP4BB%26A%3D1&data=05%7C02%7CG.S.Thompson%40kent.ac.uk%7Cbbb55b85be5a4deaea8e08dd737116ae%7C51a9fa563f32449aa7213e3f49aa5e9a%7C0%7C0%7C638793651748089400%7CUnknown%7CTWFpbGZsb3d8eyJFbXB0eU1hcGkiOnRydWUsIlYiOiIwLjAuMDAwMCIsIlAiOiJXaW4zMiIsIkFOIjoiTWFpbCIsIldUIjoyfQ%3D%3D%7C0%7C%7C%7C&sdata=pftT%2BlSbeVFQHmw%2B8TNThGn1nffdU6FnINeiQ%2FQf%2B%2FY%3D&reserved=0 This message was issued to members of https://eur01.safelinks.protection.outlook.com/?url=http%3A%2F%2Fwww.jiscmail.ac.uk%2FCCP4BB&data=05%7C02%7CG.S.Thompson%40kent.ac.uk%7Cbbb55b85be5a4deaea8e08dd737116ae%7C51a9fa563f32449aa7213e3f49aa5e9a%7C0%7C0%7C638793651748103802%7CUnknown%7CTWFpbGZsb3d8eyJFbXB0eU1hcGkiOnRydWUsIlYiOiIwLjAuMDAwMCIsIlAiOiJXaW4zMiIsIkFOIjoiTWFpbCIsIldUIjoyfQ%3D%3D%7C0%7C%7C%7C&sdata=0lAMSNvg%2B%2BMlTafewO3Tmf3tpo4dRHKEndZ9mSlsfZw%3D&reserved=0, a mailing list hosted by https://eur01.safelinks.protection.outlook.com/?url=http%3A%2F%2Fwww.jiscmail.ac.uk%2F&data=05%7C02%7CG.S.Thompson%40kent.ac.uk%7Cbbb55b85be5a4deaea8e08dd737116ae%7C51a9fa563f32449aa7213e3f49aa5e9a%7C0%7C0%7C638793651748118017%7CUnknown%7CTWFpbGZsb3d8eyJFbXB0eU1hcGkiOnRydWUsIlYiOiIwLjAuMDAwMCIsIlAiOiJXaW4zMiIsIkFOIjoiTWFpbCIsIldUIjoyfQ%3D%3D%7C0%7C%7C%7C&sdata=NHnG20Kiln1SnRVFX2vEYcSTF0LpXoHsxXYjYF0Dcl8%3D&reserved=0, terms & conditions are available at https://eur01.safelinks.protection.outlook.com/?url=https%3A%2F%2Fwww.jiscmail.ac.uk%2Fpolicyandsecurity%2F&data=05%7C02%7CG.S.Thompson%40kent.ac.uk%7Cbbb55b85be5a4deaea8e08dd737116ae%7C51a9fa563f32449aa7213e3f49aa5e9a%7C0%7C0%7C638793651748135054%7CUnknown%7CTWFpbGZsb3d8eyJFbXB0eU1hcGkiOnRydWUsIlYiOiIwLjAuMDAwMCIsIlAiOiJXaW4zMiIsIkFOIjoiTWFpbCIsIldUIjoyfQ%3D%3D%7C0%7C%7C%7C&sdata=KAXXlPpEmUeEpg5HYaIbXFxk6ehb0slYOU3LR3p%2FKwo%3D&reserved=0<Screenshot_20250404_125959_Ecosia.jpg> ######################################################################## To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 This message was issued to members of www.jiscmail.ac.uk/CCP4BB, a mailing list hosted by www.jiscmail.ac.uk, terms & conditions are available at https://www.jiscmail.ac.uk/policyandsecurity/