Dear Rafael,

I agree with the previous answers, decreasing the temperature to 16-18°C 
overnight during protein expression really helps with folding. It works wells 
with BL21(DE3) and Rosetta cells. I think there is even a E.coli strain for 
lower temperature but I have never used them myself.

Also, in our lab, we don’t use GST-tag but SUMO in some of our constructs but 
also a combination of either His6-SurA or His6-TriggerFactor to help solubilize 
the proteins. Careful with trigger factor, we experienced the protein following 
along our construct through SEC despite the tag removal step.

In overall, if you can improve the solubility of your protein without rescuing 
them from inclusion bodies, it would be better, especially if you don’t know 
how to confirm the correct folding after this step (with activity assays).

Good luck !

Marion

Sent from my iPhone, please forgive any misspellings.

Le 11 mars 2025 à 15:31, Artem Evdokimov <artem.evdoki...@gmail.com> a écrit :


Refolding protocol is often specific to the protein. As a rule of thumb, 
consider exploring refolding in large dilution regime as well as dialysis and 
on-column methods. As far as refolding GST fusions, I personally recommend 
re-cloning without GST and refolding the guest proteins by itself. This 
considerably improves the odds.

Artem

On Tue, Mar 11, 2025, 07:18 Rafael Marques 
<rafael_mmsi...@hotmail.com<mailto:rafael_mmsi...@hotmail.com>> wrote:
Hello folks,

I have been trying to purify a GST-tagged protein for a while but the results 
are far below the expected. The majority of my sample is in the pellet fraction 
and the yield of my expression is very good. This is known because the protein 
was identified both by Mass Spectrometry and Western-blot. I believe my protein 
is laying inside inclusion bodies. I have tried to diminish the IPTG 
concentration, express it for a shorter time and also different E.coli strains 
but the results are still the same. As a last resort, I was thinking about 
refolding. I found this paper (attached), from 2004, but I was wondering if 
someone who has experience regarding protein refolding could shed some light on 
this topic, principally if there are more updated protocols.

Best wishes

P.S. His-tag did not improve my results too


______________________________________________________

Rafael Marques da Silva

PhD Student – Structural Biology

University of Leicester

Mestre em Física Biomolecular
Universidade de São Paulo

Bacharel em Ciências Biológicas
Universidade Federal de São Carlos

phone: +44 07861 273773

           "A sorte acompanha uma mente bem treinada"
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