Ugly, but could you rename them to something else ;-? Best wishes, Jon Cooper. jon.b.coo...@protonmail.com
Sent from Proton Mail Android -------- Original Message -------- On 07/11/2024 11:09, Kajander, Tommi A wrote: > it doesnt seem to include waters in the analysis unfortunatelly no, at least > the web server. > > Best, > Tommi > > [Outlook for Android](https://aka.ms/AAb9ysg) > > --------------------------------------------------------------- > > Kohteesta: CCP4 bulletin board <CCP4BB@JISCMAIL.AC.UK> henkilön Jon Cooper > <0000488a26d62010-dmarc-requ...@jiscmail.ac.uk> puolesta > Lähetetty: torstaina, marraskuuta 7, 2024 12:39:07 ip. > Vastaanottaja: CCP4BB@JISCMAIL.AC.UK <CCP4BB@JISCMAIL.AC.UK> > Aihe: Re: [ccp4bb] Analysing water molecules at protein interfaces > > Is it possible to extract this info from pdbepisa? > > Best wishes, Jon Cooper. > Emeritus at UCL. > > jon.b.coo...@protonmail.com > Sent from Proton Mail Android > > -------- Original Message -------- > On 07/11/2024 09:31, Italo Carugo Oliviero wrote: > >> Dear Tommi, >> you could write a program (perhaps with ChatGPT) that (i) stores water >> molecules, (ii) stores protein atoms, and (iii) searches, among the water >> molecules, for those that are close to two protein atoms that belong to >> different chains. >> Oliviero >> >> Il giorno mer 6 nov 2024 alle ore 16:43 Kajander, Tommi A >> <tommi.kajan...@helsinki.fi> ha scritto: >> >>> Dear all, >>> >>> Is there a something available to automatically analyse/identifiy/quantify >>> bound (“bridging”) water molecules at protein-protein interfaces? Could not >>> find anyting right away. >>> >>> Thanks in advance, >>> >>> Best, >>> >>> Tommi >>> >>> --------------------------------------------------------------- >>> >>> To unsubscribe from the CCP4BB list, click the following link: >>> https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 >> >> --------------------------------------------------------------- >> >> To unsubscribe from the CCP4BB list, click the following link: >> https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 > > --------------------------------------------------------------- > > To unsubscribe from the CCP4BB list, click the following link: > https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 ######################################################################## To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 This message was issued to members of www.jiscmail.ac.uk/CCP4BB, a mailing list hosted by www.jiscmail.ac.uk, terms & conditions are available at https://www.jiscmail.ac.uk/policyandsecurity/
